Gene Slin_3270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3270 
Symbol 
ID8727023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3951952 
End bp3952956 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content54% 
IMG OID 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_003388080 
Protein GI284038150 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.50722 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAACAA CAGATATGTG CATAATAGGC GCGGGTCCGG TGGGTCTGTT CGCCGTTTTT 
GAAGCCGGTT TATTGAAAAT GCGCTGCCAC CTGATCGATG CCCTGCCGCA GGTGGGTGGT
CAGCTTTCGG AGATTTATCC GCAGAAACCA ATCTACGATA TTCCGGGCTA TCCGGCTGTA
AACGCTCAAA CGCTGGTCGA TAACCTGATG GAGCAAATTG CGCCTTTCAA TCCGGGGTTT
ACACTGGGCG AGCGTGTCGA CGGGCTCGAC ACGCAACCCG ATGGGTCCTA CATAGTGACT
ACAAATGAGG GCACAGCCGT CCACTGCCAG GTGGTGGTCA TTGCCGGTGG TCTGGGCTGC
TTTGAGCCGC GTAAGCCGGA AATTGTGAAC CTCGAACGAT TTGAAGGTAA GGGCGTTGCC
TACATGGTGA AGAATCCCGA GCAACTGCGT GACCGCCGGG TGGTACTGGC CGGTGGGGGA
GACTCGGCCC TCGACTGGAC GGTTTTTCTG TCCAACATCG CCAGTGAAGT AACGCTGGTT
CACCGAAGTG ATACGTTCCG GGGCGCTCCC GATTCGGCCG AAAAGGTGTT CCATCTGGCA
AGTCAGGGCA AGATCAACCT GGTGCTGCAA TCGAACATTA CCAGCATCAA CGGGAACGGG
CATTTGCAGG AGGTGAGCAT TACGGCAAAA GATAAATCCG TAAAAACCAT TGAAGCCGAC
CACCTGATTC CGCTCTTCGG CCTGACGCCC AAGCTCGGGC CCATCGCCGA TTGGGGACTT
ACCATCGACA AAGCCGCCAT CAGCGTTAAC ACTACCGATT ATTCCACCAA CGTGGACCGT
ATTTATGCCA TTGGTGATAT AAACACGTAT CCGGGTAAGC TGAAGCTGAT CTTATGCGGT
TTCCATGAAG CGGCACTCAT GTGCCAGAGT GCATTCCGGC ATGTGCACCC CGACCAGAAA
CTGAGTTTCA AATACACCAC CGTGAACGGT GTTCCTACTT TTTAA
 
Protein sequence
MITTDMCIIG AGPVGLFAVF EAGLLKMRCH LIDALPQVGG QLSEIYPQKP IYDIPGYPAV 
NAQTLVDNLM EQIAPFNPGF TLGERVDGLD TQPDGSYIVT TNEGTAVHCQ VVVIAGGLGC
FEPRKPEIVN LERFEGKGVA YMVKNPEQLR DRRVVLAGGG DSALDWTVFL SNIASEVTLV
HRSDTFRGAP DSAEKVFHLA SQGKINLVLQ SNITSINGNG HLQEVSITAK DKSVKTIEAD
HLIPLFGLTP KLGPIADWGL TIDKAAISVN TTDYSTNVDR IYAIGDINTY PGKLKLILCG
FHEAALMCQS AFRHVHPDQK LSFKYTTVNG VPTF