Gene Slin_3261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3261 
Symbol 
ID8727014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3941380 
End bp3942129 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content52% 
IMG OID 
ProductBeta-lactamase 
Protein accessionYP_003388071 
Protein GI284038141 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.611903 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.804971 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTACTC TACTTACCCT TTTATTTTTC TCAGGACTCA TCGTGTCTTT ACAGGCACAG 
TCGGCGAAAA AACCGGGGCT TTTGGTCACG CCACTCAACA AACAGGTGTT TGTTCATACC
ACCTATGGTC TGTACAAAAA TGAAGCCGTC CCATCTAACG GGCTGATCAT TAAAACGAAA
GGTGGCATTG TGCTGGTCGA CACTGGCTGG GATACCGACA CCAATACCGA CAACACCCGT
GAGCTACTCC GATGGGTCAG CACCAACCTC CACCAACCTG TCCGGCTGTG TATTGTCACG
CATGCCCACG AAGACCGGGT AGGCGGCATC AGCGAACTTC GTAAAGCGGG CGTTCGGGTG
GTAAGTACAC CCCTCACCGC TCAGAAATCG GTAAAGCTTG GGTTTGAATC CCCAGAGGCA
GTTTTACCGA ACGATACGAC CTTTTCAATC GGCAACGAAC CGATCCGCTG CTACTTTCCA
GGGCAAGGCC ACACCCCCGA TAACATTGTG GTGTGGTTAC CCAATCAAAA GATTTTATAC
GGCGGCTGTC TCGTAAAAAG CGTTGCCGCC TTCGGCATGG GGAACCTCGC CGACGCCAAC
CTAAACGAGT GGGGCAACTC GATCCAGAAC CTGATGACGC AGTTTAAATC GGCCCGGATT
GTTGTACCGG GGCATGACGA GTGGACCGAT ACCCGGTCGC TGGCGCATAC CTTACAACTA
CTAAAGAAAC ACGCTGAGGC TAAAAAGTAA
 
Protein sequence
MRTLLTLLFF SGLIVSLQAQ SAKKPGLLVT PLNKQVFVHT TYGLYKNEAV PSNGLIIKTK 
GGIVLVDTGW DTDTNTDNTR ELLRWVSTNL HQPVRLCIVT HAHEDRVGGI SELRKAGVRV
VSTPLTAQKS VKLGFESPEA VLPNDTTFSI GNEPIRCYFP GQGHTPDNIV VWLPNQKILY
GGCLVKSVAA FGMGNLADAN LNEWGNSIQN LMTQFKSARI VVPGHDEWTD TRSLAHTLQL
LKKHAEAKK