Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3259 |
Symbol | |
ID | 8727012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 3939364 |
End bp | 3939948 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | |
Product | putative transcriptional regulator, Crp/Fnr family |
Protein accession | YP_003388069 |
Protein GI | 284038139 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.948479 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATTCAT CTTTACTTCG TCTAAAGCAG CTTGTTCAGG CAATTCATCC GCTCTCAGAA CAGGAATGGA CAGCGTTCTC CGGAATTTGG CACCCCTATT CCGCAAAGCG AAAGGAAATT CTAACGGTTG CCAATCAGCA GGAAAACTAT TTATATTTTG TGGTGGAAGG CGTACAACAC GTTTATTACT TCGATGACCA AAATCGAGAA GCAACGCTAA TTTTTTCCTA TCCCTCTTCG TTCGGTGGAG TGGTCGATTC GTTCATGTTA CGCCATGCTT CGCGATACTA CTACGAAACA TTGACCACAT CCTCTTTTCT GCGGGCTTCC TACACTGATC TGGAGACAGT TATGCGACAT AACCGTGGGG TAGAAACCAT GGTTCGGCTG GGGATTACCG GGGCCTTGTC GGGCGTGCTG GAACGGTTAG TGGAACTACA ATGCTATTCG TCCGCCGATA AATTCAGGAA ACTTCTTCAG CGCAGTCCGC ATATCTTACA GCTTGTTCCC CATAAATACC TGGCCAGGTA TATTGGCGTT GACCCGACGA ATTTCAGTAA GTTTATTAAC TCCATAAAGG CATGA
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Protein sequence | MHSSLLRLKQ LVQAIHPLSE QEWTAFSGIW HPYSAKRKEI LTVANQQENY LYFVVEGVQH VYYFDDQNRE ATLIFSYPSS FGGVVDSFML RHASRYYYET LTTSSFLRAS YTDLETVMRH NRGVETMVRL GITGALSGVL ERLVELQCYS SADKFRKLLQ RSPHILQLVP HKYLARYIGV DPTNFSKFIN SIKA
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