Gene Slin_3259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3259 
Symbol 
ID8727012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3939364 
End bp3939948 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content46% 
IMG OID 
Productputative transcriptional regulator, Crp/Fnr family 
Protein accessionYP_003388069 
Protein GI284038139 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.948479 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTCAT CTTTACTTCG TCTAAAGCAG CTTGTTCAGG CAATTCATCC GCTCTCAGAA 
CAGGAATGGA CAGCGTTCTC CGGAATTTGG CACCCCTATT CCGCAAAGCG AAAGGAAATT
CTAACGGTTG CCAATCAGCA GGAAAACTAT TTATATTTTG TGGTGGAAGG CGTACAACAC
GTTTATTACT TCGATGACCA AAATCGAGAA GCAACGCTAA TTTTTTCCTA TCCCTCTTCG
TTCGGTGGAG TGGTCGATTC GTTCATGTTA CGCCATGCTT CGCGATACTA CTACGAAACA
TTGACCACAT CCTCTTTTCT GCGGGCTTCC TACACTGATC TGGAGACAGT TATGCGACAT
AACCGTGGGG TAGAAACCAT GGTTCGGCTG GGGATTACCG GGGCCTTGTC GGGCGTGCTG
GAACGGTTAG TGGAACTACA ATGCTATTCG TCCGCCGATA AATTCAGGAA ACTTCTTCAG
CGCAGTCCGC ATATCTTACA GCTTGTTCCC CATAAATACC TGGCCAGGTA TATTGGCGTT
GACCCGACGA ATTTCAGTAA GTTTATTAAC TCCATAAAGG CATGA
 
Protein sequence
MHSSLLRLKQ LVQAIHPLSE QEWTAFSGIW HPYSAKRKEI LTVANQQENY LYFVVEGVQH 
VYYFDDQNRE ATLIFSYPSS FGGVVDSFML RHASRYYYET LTTSSFLRAS YTDLETVMRH
NRGVETMVRL GITGALSGVL ERLVELQCYS SADKFRKLLQ RSPHILQLVP HKYLARYIGV
DPTNFSKFIN SIKA