Gene Slin_3237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3237 
Symbol 
ID8726990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3921312 
End bp3922409 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content47% 
IMG OID 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003388047 
Protein GI284038117 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.563369 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGATA AAATGGTTAC GCAGAATCAG GGTCGTCGTC AACCGTACGG AAGCTTTGTT 
GATGTCTATT GCAACACCTT TTCTCCGGTT TACAAGCTTC AGTTCAACCC AAAAGATAAA
ACGCCTAAGT ACAAGCAGAT TGTCCAGTCT GTTATCACGG ATATTGAGCG GGGTGTTCTG
AAAAACAATG AGCAGCTGCC TTCGATCAGT GAATTGAGCG TTGAATATTA CCTGGCCCGC
GATACCGTTG AGAAAGCGTA CCGCGAACTT CGGGAGCGCG GCTACATCAC GTCGGTACAG
GGGAAGGGGT ACTATGTACA GAGCCAGTCG ACCACTAAAC TTAAGATTCT GCTGGTTTTT
AATAAGCTTA GTTCCTACAA GAAAATAATC TATTACGCTT TTCTGAAAGC ACTTGGCGAC
AAAGCAACGG TTGATCTTCA GATTCACCAT TACAACGCGC GCCATTTCCA GGAGATCATT
GAGAAAAATC TGGGCAAATA CAATTATTAT GTTGTTATGC CGCACTTCAC CCAGGAGTTG
GACAAGGCCA ATTACCTGGA CGTTCTCGAA TCCATACCCG CCAATGAATT GGTATTGCTC
GACAAAGACG TATTGGAGTT AGAAAGCTCT CCCCTCAGCG TTTACCAGAA CTTTGACAAA
GACATCTGCG AAGCCCTGGA AAACGCGCAG GATTTGCTGA AAAAATACAG CCGAATGGTA
CTCACGCTGC CCAGCGATGG CAATTACCCT TCCGAAATAG CGCACGGGTT CCGGTCATTC
TGCATCAATT ACGAAAAAGA GTTCAGCATT AAGGAAAACG CCATCGACGA AACGATTCAG
CCGGGAACAG CCTATGTGGT TGTGGAAGAG ACGGACCTGT CGGAGTTGGT AAAGAAGGTT
CGCCAGTCCA ACTACGAACT CGGTCGGGAA ATTGGCATTA TTTCCTTTAA TGAAACGACG
CTTAAGGAGT TGCTGAACAT CACGGTCATC ACCACCGACT TCGAAGCAAT GGGCTACACC
GCAGCCTCCC TCTTACTCGA CAACAAGCGG ATTAAGGTCA AAAATCCGTT CTACATGATC
CGGCGCGGCT CGTTGTGA
 
Protein sequence
MVDKMVTQNQ GRRQPYGSFV DVYCNTFSPV YKLQFNPKDK TPKYKQIVQS VITDIERGVL 
KNNEQLPSIS ELSVEYYLAR DTVEKAYREL RERGYITSVQ GKGYYVQSQS TTKLKILLVF
NKLSSYKKII YYAFLKALGD KATVDLQIHH YNARHFQEII EKNLGKYNYY VVMPHFTQEL
DKANYLDVLE SIPANELVLL DKDVLELESS PLSVYQNFDK DICEALENAQ DLLKKYSRMV
LTLPSDGNYP SEIAHGFRSF CINYEKEFSI KENAIDETIQ PGTAYVVVEE TDLSELVKKV
RQSNYELGRE IGIISFNETT LKELLNITVI TTDFEAMGYT AASLLLDNKR IKVKNPFYMI
RRGSL