Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3237 |
Symbol | |
ID | 8726990 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 3921312 |
End bp | 3922409 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | transcriptional regulator, GntR family |
Protein accession | YP_003388047 |
Protein GI | 284038117 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.563369 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGATA AAATGGTTAC GCAGAATCAG GGTCGTCGTC AACCGTACGG AAGCTTTGTT GATGTCTATT GCAACACCTT TTCTCCGGTT TACAAGCTTC AGTTCAACCC AAAAGATAAA ACGCCTAAGT ACAAGCAGAT TGTCCAGTCT GTTATCACGG ATATTGAGCG GGGTGTTCTG AAAAACAATG AGCAGCTGCC TTCGATCAGT GAATTGAGCG TTGAATATTA CCTGGCCCGC GATACCGTTG AGAAAGCGTA CCGCGAACTT CGGGAGCGCG GCTACATCAC GTCGGTACAG GGGAAGGGGT ACTATGTACA GAGCCAGTCG ACCACTAAAC TTAAGATTCT GCTGGTTTTT AATAAGCTTA GTTCCTACAA GAAAATAATC TATTACGCTT TTCTGAAAGC ACTTGGCGAC AAAGCAACGG TTGATCTTCA GATTCACCAT TACAACGCGC GCCATTTCCA GGAGATCATT GAGAAAAATC TGGGCAAATA CAATTATTAT GTTGTTATGC CGCACTTCAC CCAGGAGTTG GACAAGGCCA ATTACCTGGA CGTTCTCGAA TCCATACCCG CCAATGAATT GGTATTGCTC GACAAAGACG TATTGGAGTT AGAAAGCTCT CCCCTCAGCG TTTACCAGAA CTTTGACAAA GACATCTGCG AAGCCCTGGA AAACGCGCAG GATTTGCTGA AAAAATACAG CCGAATGGTA CTCACGCTGC CCAGCGATGG CAATTACCCT TCCGAAATAG CGCACGGGTT CCGGTCATTC TGCATCAATT ACGAAAAAGA GTTCAGCATT AAGGAAAACG CCATCGACGA AACGATTCAG CCGGGAACAG CCTATGTGGT TGTGGAAGAG ACGGACCTGT CGGAGTTGGT AAAGAAGGTT CGCCAGTCCA ACTACGAACT CGGTCGGGAA ATTGGCATTA TTTCCTTTAA TGAAACGACG CTTAAGGAGT TGCTGAACAT CACGGTCATC ACCACCGACT TCGAAGCAAT GGGCTACACC GCAGCCTCCC TCTTACTCGA CAACAAGCGG ATTAAGGTCA AAAATCCGTT CTACATGATC CGGCGCGGCT CGTTGTGA
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Protein sequence | MVDKMVTQNQ GRRQPYGSFV DVYCNTFSPV YKLQFNPKDK TPKYKQIVQS VITDIERGVL KNNEQLPSIS ELSVEYYLAR DTVEKAYREL RERGYITSVQ GKGYYVQSQS TTKLKILLVF NKLSSYKKII YYAFLKALGD KATVDLQIHH YNARHFQEII EKNLGKYNYY VVMPHFTQEL DKANYLDVLE SIPANELVLL DKDVLELESS PLSVYQNFDK DICEALENAQ DLLKKYSRMV LTLPSDGNYP SEIAHGFRSF CINYEKEFSI KENAIDETIQ PGTAYVVVEE TDLSELVKKV RQSNYELGRE IGIISFNETT LKELLNITVI TTDFEAMGYT AASLLLDNKR IKVKNPFYMI RRGSL
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