Gene Slin_3234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3234 
Symbol 
ID8726987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3916175 
End bp3917806 
Gene Length1632 bp 
Protein Length543 aa 
Translation table11 
GC content55% 
IMG OID 
ProductAmidohydrolase 3 
Protein accessionYP_003388044 
Protein GI284038114 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.926046 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGAC TCGTACTGCT GATTCCTGTA CTATTAACCC TGCTTTCCGG CTGTTCGTCT 
AAGAAAAAAG CCGATCTGCT CGTCACCAAC GCCCACATTT ATACCGCCGA TTCGACCTTC
TCTGTTGCCG ATGCCTTCGT GGTTAAAGAT GGTAAATTTA TTGCCGTTGG CCCGGCTTCT
ACCCTAACCA ACGAATACGA AGCCGACAGT ACAGCCGATC TTGGCGGTCA GCCGGTGTAC
CCCGGCCTGT ACGACCCACA CGCCCACTTT CTAGGGTTGG GTCAGGTACT TAACCAGGCC
GATCTGGTAG GTACCACGTC CTACGATGAC CTGCTCGAAC GCCTGAAAGC CTTCCGGAAA
CAGCACCCCG ATGCCCTCTG GCTCACTGGT CGGGGCTGGG ACCAGAACGA CTGGCCCGAA
AAAACATTTC CGACCAAAGA GAAACTGGAC GCGGCTTTCC CCGATGTGCC GGTGGCTCTG
ATGCGGGTAG ATGGCCATGC CCTGTTCGTC AATTCGAAGG CGCTTCGACT GGCGCAGGTA
ACGGCGGGCT CCAAAATGCC GGGTGGCGAA ATTATTCTTG CCAATGGACA GCCAACCGGA
ATCCTGGTCG ATAACGCCAT GCAGTTGATC AAACGGGTAA TTCCCCAGCC CGACCTGGCT
GATAAAGCGA AGATGCTACT CGCGGCCGAA AAGGTTTGTG TCTCGCTCGG CCTGACAAGC
ATCTCCGACG CCGGTATTAG TCCCGATGAA ATCAACCTGA TTGACAGCCT GCACAAAACG
AACAAATTGA AAATCAGAGA TTACGCAATG GTTAGCCTGG GCGAGCCAAA CCTGAATTAT
TTTCTGAAAC GAGGCCCTTT CCAAACCGAC CGGCTGACGG TTCGTTCGTT TAAACTCTAT
GCCGATGGCG CACTGGGTTC GCGGGGTGCC TGCCTCCGGA AACCGTACAG CGACCGGCCC
GAAACCGGCG GTTTTCTGCT GCTTAGTCCC TCGGAACTGG AGCGGGTTAG TAAATTGCTG
TACGATTCTA AATTTCAGGC CAACACACAC TGCATCGGCG ATTCGGCAAA CCACCTCATG
CTCGACATTT ACGGGAAGCT GCTGAAAGGC AAAAACGACC GGCGCTGGCG TATTGAACAC
GCTCAGGTTG TATCGGCCGA TGATTTCTGG AAGTTTGGGC GGTATTCGAT CATTCCATCC
GTTCAGCCCA CGCACGCTAC CTCAGACATG TACTGGGCCA CCGAACGACT GGGACCGGTT
CGGGTGAAAG GTGCCTATGC GTTCAAGGAT TTGATGAAAC AGAATAACGT GATTGCCTTT
GGCAGCGATT TTCCGGTAGA AGCGGTGAAT CCACTGTTCG GATTTCACTC GGCGGTGGCC
CGGCAGGATG CGAAAAACTT CCCCAAAGGC GGTTACCAGA TGGAAAACGC CGTTGACCGG
AAGTCGGCTC TGCTGGCGAT GACGCGCTGG GCGGCTTATG CCTGTTTTGA AGACCATCTG
CGCGGCAGTA TCGCGCCCGG CAAGCAAGCT GATTTTGTTA TTCTGGACCG TGACATCATG
ACTGCCCCCG CTCCCGAGCT ACGGACGACA AAAGTGAAGC AAACCTGGAT TGGTGGCGAA
CGGGTCTTTT AA
 
Protein sequence
MNRLVLLIPV LLTLLSGCSS KKKADLLVTN AHIYTADSTF SVADAFVVKD GKFIAVGPAS 
TLTNEYEADS TADLGGQPVY PGLYDPHAHF LGLGQVLNQA DLVGTTSYDD LLERLKAFRK
QHPDALWLTG RGWDQNDWPE KTFPTKEKLD AAFPDVPVAL MRVDGHALFV NSKALRLAQV
TAGSKMPGGE IILANGQPTG ILVDNAMQLI KRVIPQPDLA DKAKMLLAAE KVCVSLGLTS
ISDAGISPDE INLIDSLHKT NKLKIRDYAM VSLGEPNLNY FLKRGPFQTD RLTVRSFKLY
ADGALGSRGA CLRKPYSDRP ETGGFLLLSP SELERVSKLL YDSKFQANTH CIGDSANHLM
LDIYGKLLKG KNDRRWRIEH AQVVSADDFW KFGRYSIIPS VQPTHATSDM YWATERLGPV
RVKGAYAFKD LMKQNNVIAF GSDFPVEAVN PLFGFHSAVA RQDAKNFPKG GYQMENAVDR
KSALLAMTRW AAYACFEDHL RGSIAPGKQA DFVILDRDIM TAPAPELRTT KVKQTWIGGE
RVF