| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3233 |
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| Symbol | |
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| ID | 8726986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 3914680 |
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| End bp | 3916068 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003388043 |
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| Protein GI | 284038113 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.367218 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.578966 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTCA GTAGCTGGAT ATTTTTTACC TGTATCTCCT TTTCTGCCCT CGCTCAACAA
ACTCCCAATG CTATTCAACG TGCTCAGCAA CGAACCTTTA CGGTAGCTAC AATTCCGCAG
CCCGGCGAAG TGCTAACGTT GCAACAGGCT ATTGCTCAAT CTATTGAGAA GAATTATCAG
ATTCAGATCA ATCGTTCGCA GGAAGACATC GCCCGAAATA ACTTTACCAA AGGCAATGCC
GGTTATCTTC CTGTGTTGAC CTTTAATGGT AACTCAAACG GAGGTATACA GAATTTCCGT
CAGACATTCA TTGATAACAT TCGACCTCCT CAGGAAGCGC ACGGTATCTT CAACCGAACC
TCTAATTTGG GTGTTAACCT GAATTACACC GTTTTTAATG GCTATGCCCG CTCCACATTA
TACAATCAGT TAGACCAGCT GGTAAAAATT GGGACGGTAA ATACACGGGC TAACGTCGAG
GCTACCGTTG CTAGTATAGC CACCAGTTAT TACGATGTTG TCCGGCAGCT GCAGCGCCTG
ATCGCCTTCA GTCAGGCACT CGACATTTCG CGCGAACGGC TCGAACTGGC GCGGGCCAAC
TACGAGGTCG GCACGCGCTC TAAAGTTGAC TTCCTGAGTG CTCAGGTCGA CTATAACACC
GACAGCGCTG CCCTGATTTC GCAGGAACAG GCTCTTCGTA ATGCCAAGAC CTTACTGAAT
TCGCAACTCA TCCGCGATCC GCAGGCTGAA TTTGCCGTAC GCGATACGAT CATCGTTCGG
CCAACGCTTC AACTGGAATC ACTGCAGCAA TCGCTGAGCA CCAACAACCC GTTATTGGCG
GCTGCCGTAC TGAACCGGAC CATCGCGGAT CTAAATGTTC GACTGGCCAA TGCGGCTCAG
TTACCGCTTG TGTCGGCTAC GACGGGTTAT AACTACCAAT TTCAGGATAA CCAGGGTGGT
TTTGGGGTAG CGACCGGCCG TACCGGAGCA CTCACCTATA ACATAACGGC CACCATACCC
ATTTTTAACG GCTACAACCT GAAACGCCAG ATTCAGAACG CCCGGGTGAA TACCATAATC
GCACAGAATC AGGAGAGCAA TCAGCGGCTT CAGTTGCAGC TGGCATTGGT GCAGACGTAT
CAGGCCTATC AGACGAGCAT TCGCCTGCTG AACCTCGAAG TGCAGAATAA CCTGCTGGCT
AATCAGAACG TCGACATTGC GTATGATCGC TATCGGATTG GGAACTCTAC ATTCGTGGAA
TTTCGTGATG TACAGCGAAA TGCCATTAAC GCCCAAACCC GTCTGATCGA GGCTGAATTC
AATGCTAAAG CGGCCGAGAT CGAATTACTC CGTCTGAGCA GCACCATTAC CCAGGAGTTA
GGGCAGTAA
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| Protein sequence | MKLSSWIFFT CISFSALAQQ TPNAIQRAQQ RTFTVATIPQ PGEVLTLQQA IAQSIEKNYQ
IQINRSQEDI ARNNFTKGNA GYLPVLTFNG NSNGGIQNFR QTFIDNIRPP QEAHGIFNRT
SNLGVNLNYT VFNGYARSTL YNQLDQLVKI GTVNTRANVE ATVASIATSY YDVVRQLQRL
IAFSQALDIS RERLELARAN YEVGTRSKVD FLSAQVDYNT DSAALISQEQ ALRNAKTLLN
SQLIRDPQAE FAVRDTIIVR PTLQLESLQQ SLSTNNPLLA AAVLNRTIAD LNVRLANAAQ
LPLVSATTGY NYQFQDNQGG FGVATGRTGA LTYNITATIP IFNGYNLKRQ IQNARVNTII
AQNQESNQRL QLQLALVQTY QAYQTSIRLL NLEVQNNLLA NQNVDIAYDR YRIGNSTFVE
FRDVQRNAIN AQTRLIEAEF NAKAAEIELL RLSSTITQEL GQ
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