Gene Slin_3213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3213 
Symbol 
ID8726966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3892346 
End bp3892885 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content49% 
IMG OID 
ProductATP synthase F1, delta subunit 
Protein accessionYP_003388023 
Protein GI284038093 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.167436 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTCG CTACTGTTGC CGCTCGCTAC GCCAAATCGC TGTTAGATCT GGCGCAGGAG 
CAAGGCCTGA CCGAGACGAT GTACAAGGAC ATGCAGTTGT TCAAAAACAC AGTTGACCAA
AGTCGTCCGC TGATGTTGAT GCTGAAGAAC CCCATTGTCC GCGCAGAAAA GAAAAGTGCC
GTCATTAAAG CTGCTTTTGC CAATCGGGTT AACCCAATGA CGATGGCTTT CTTCGAAATC
ATTGGCAAAA AGAACCGAGA GGGGATTATG GACGCCATTG CTGAGCAGTT TATCAGTCAG
TACGACCAAC TGAAAGGGGT TGGACGGGCT ACCGTTATTA CCACTGTTCC GCTTACAGCT
GCCCAGCGTG ATACATTCAA GGCAATGGTC ACGAAGGCAA CGGGAAGTAA CTCCGTTGAA
CTGGAAGAAA AGATCGATTC GAAATTGATT GGTGGATATG TCCTGCGTTT AGGCGACCGT
CAGGTTGATG GCTCGATCCG TAGTCAATTG AACGACATTC GCTTAAAGTT CCTGAACTAG
 
Protein sequence
MAVATVAARY AKSLLDLAQE QGLTETMYKD MQLFKNTVDQ SRPLMLMLKN PIVRAEKKSA 
VIKAAFANRV NPMTMAFFEI IGKKNREGIM DAIAEQFISQ YDQLKGVGRA TVITTVPLTA
AQRDTFKAMV TKATGSNSVE LEEKIDSKLI GGYVLRLGDR QVDGSIRSQL NDIRLKFLN