Gene Slin_3212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3212 
Symbol 
ID8726965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3891323 
End bp3892237 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content50% 
IMG OID 
Productbeta-lactamase 
Protein accessionYP_003388022 
Protein GI284038092 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.184009 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTTAT TAGCTGTTAG CCTTCTCTTT TCTATTTATT CATTTGTTAC AAACGGTCAA 
TCGTCCCAAA AACGGGATGC CGTTCTGGAG CGCAAACTTC AGACGGCGTT AAAGGGCTTT
CGAGGAGATG TTGGCGTCTA TGTCCACAAT TTAAAGACGG GGGTAACGGT AGCTATCAAG
GCCGACACCT TATTTCCAAC GGCCAGCACG ATTAAAATAC CAATCCAATG CGGTCTTTTT
GATAAAATTC ACAAAGGCGA ATTGACGTAC GGACAAACCC TGATTTATAA AGACTCCCTT
CATTATGACG ATGGCATTGT CGGTTCTCTT AAAGACGGGG CTAAAATTCC CTTGAGTGAG
GTTGTCATGC TCATGGAAAC CGTCAGCGAC AATACCGCCA GTTTATGGTG TCAGGCGCTG
GCAGGCGGAG GCACAGCCAT TAATACCTGG CTCGAGAGTA ACGGATTTCG CAAGACACGT
GTCAACTCAC GCACACCGGG CCGTGAAGCA GATCGGACGC GTTACGGTTG GGGACAGACT
ACGCCCCGTG AAATGGCCGA CCTAATGACC TACATCCGCC AGGGCCGCGC CGTCAGTCCG
GATGCCAGCG AGGAAATGTA CCGGAATCTT GGCCGTCAGT ATTGGGATAA CGACGGGCTG
TCGCAGGTGC CGCCGGATGT AAAAACGGCT TGTAAGAATG GAGCCGTCAA CCAGTCGCGC
TCAGAAGTTG TGCTTGTACA CGCGCCCCAT GGCGATTATG TATACTGCGT TATGACGAAG
AATCAGCAGG ACGAGAGTTG GGAGCGAACA AATGAAGGTT TTGCTCTTTT ACGCAACGTC
GGGACTTTGT TATGGCAGCA TTTCGAGCCG AAGTCTACCT GGAAACCCAG TGCAGGCTAC
GAAAAATGGT GGTAA
 
Protein sequence
MRLLAVSLLF SIYSFVTNGQ SSQKRDAVLE RKLQTALKGF RGDVGVYVHN LKTGVTVAIK 
ADTLFPTAST IKIPIQCGLF DKIHKGELTY GQTLIYKDSL HYDDGIVGSL KDGAKIPLSE
VVMLMETVSD NTASLWCQAL AGGGTAINTW LESNGFRKTR VNSRTPGREA DRTRYGWGQT
TPREMADLMT YIRQGRAVSP DASEEMYRNL GRQYWDNDGL SQVPPDVKTA CKNGAVNQSR
SEVVLVHAPH GDYVYCVMTK NQQDESWERT NEGFALLRNV GTLLWQHFEP KSTWKPSAGY
EKWW