Gene Slin_3207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3207 
Symbol 
ID8726960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3885157 
End bp3886200 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content44% 
IMG OID 
Producthistidine kinase 
Protein accessionYP_003388017 
Protein GI284038087 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00238507 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.252728 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCAAT TCGACCTATC TATTGAATAC CGCATCATCG TCGGCATCTC AGCGATGGTT 
TTACTGTTCA GCGGCTTCCT CATATCCTTT ATAACGTCGC AACGAAAAAA AATTCAACAT
CATAGAGAAG TGGAATTGCT GCATGAGCAA CAAAAGAAAC TACTCATGCA GCAAAATGAT
CAGTTAGAGC AGCGGGTTAA GGAGAGAACC ACAGAATTAA GAGAGCAAAA AGAAGCATTG
CAGATTTCTC TCACAGAGCT CAAGTCGACA CAGATGCAGT TAATTCAGAA GGAGAAGTTG
GCGTCACTTG GCGAACTGAC GGCTGGCATT GCTCACGAAA TTCAAAATCC GCTTAACTTC
GTAAAAAACT TTTCGGAATT ATCCATCGAG TTCATTAGTG AGTTAAAGCA GGAAGTCAGG
GCGGGTAACG AAAAAAGTGT GCTTGACCTT GCCGAAATAC TTTCTAAGAA CCTGGAAAAA
ATTAGTACAC ACGGCAACCG GGCCAGCCGC ATTGTAAAAG GTATGCTCGA ACACTCTCGA
TTGAGTTCCG GTGAACGGAG GCCCACCGAC CTAAATGCGT TAGTTGATGA GTATGTAAAA
TTGGCGTACC ACGGTTCACG AGCTAAGGAT AACGAGTTTA CGTGTAAGCT TGTAACCGTC
CTCGACCCAA AGCTAGTCAA ATTCAACATT ATCCCTCAGG AGATCGGCCG CGTGTTGCTA
AACTTATTAA ACAACGCTTT TTACGCTGTA CGGGAAAAAA AGAAAAACGC AGATCCCTCC
TACCAACCTA CAGTTACGGC AAGTACTGCA TTGATCGATA ATCAGGTTGA AATTCGGGTA
CTCGACAACG GAATTGGGAT ACCGGATTCA ATTAAAGCCA AAATATTCCA GCCCTTTTTC
ACCACAAAAC CCACCGGAGA GGGCACTGGT CTCGGCCTAT CGCTAAGCTA TGACATCATT
ACCAAAGGCC ATAACGGTGG ACTAGAAGTG AAAACCGAAG CAGATGGAGC CACTGAGTTT
ATTATTCAAC TCCCCCTTGC TTAG
 
Protein sequence
MYQFDLSIEY RIIVGISAMV LLFSGFLISF ITSQRKKIQH HREVELLHEQ QKKLLMQQND 
QLEQRVKERT TELREQKEAL QISLTELKST QMQLIQKEKL ASLGELTAGI AHEIQNPLNF
VKNFSELSIE FISELKQEVR AGNEKSVLDL AEILSKNLEK ISTHGNRASR IVKGMLEHSR
LSSGERRPTD LNALVDEYVK LAYHGSRAKD NEFTCKLVTV LDPKLVKFNI IPQEIGRVLL
NLLNNAFYAV REKKKNADPS YQPTVTASTA LIDNQVEIRV LDNGIGIPDS IKAKIFQPFF
TTKPTGEGTG LGLSLSYDII TKGHNGGLEV KTEADGATEF IIQLPLA