| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3203 |
|---|
| Symbol | |
|---|
| ID | 8726956 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 3880852 |
|---|
| End bp | 3881880 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | Gluconolactonase |
|---|
| Protein accession | YP_003388013 |
|---|
| Protein GI | 284038083 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000000499471 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.0664267 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTAA ACTCTATTCT ACTCGTCGGC TTGTTGAGCG TTATCTATTG TCCGCTCATG
GCTCAGCCGA CGCCTTTTCC CACGATTGGC CAGATAGTGC GGGTCGACCC GCGTCTGGAT
AAGTTGATTT CTGCGGAGGC CAACGTTGAG GTGCTGGCCA ATGGTTTCGT CTGGACCGAA
GGGCCCATTT GGGTTAAAGA CCAGGGGTTT CTGCTTTTTT CGGATGTGCC GCAAAACACG
ATTTTTAAAT GGACAGAAAA AGACGGGGTT ACGCCATTTC TGAAGCCATC CGGCTATACG
GGTGTGGGGG CGTACAGTGA TGAACCCGGT TCCAACGGGC TAACCATCGA CCGGCAGGGA
CGGCTCATTG CCTGTGAGCA CGGCGACCGG CGCGTAACGG CTATGCCGCT AAACGGCACC
GGCGGCAAAC GTACGCTGGC CGATAACGTT AACGGCAAAC GATTCAATAG TCCGAACGAT
GTAGTGGCGC ACTCCAATGG AAGCTATTAC TTTACTGATC CACCGTACGG CATGCCTAAA
AAAGAAAAAG ATCCGGGAAA AGAAACGGAT GGGTGGGGCG TGTACCGGAT TGCTCCCGAA
CGGGCTGGCG TACCCGGTGC GGTGTCGATA GTTGTAAGCG ACCTTAACCG CCCGAACGGT
ATAGCGCTGT CGCCAGATGA AAAAACCCTT TACGTGGCGC AGTCCGACCC ACTTCGGCCG
CTTGTCATGG CCTACCCTCT GCAAGCCGAC GGTTCGGTGG GGAAAGGACG GGAGGTTTTT
GGTGCAGTGG GCATGAAAAA ATTGGGTTTG GAAGGTGGCT TCGACGGAAT GAAAGTAGAC
CGTGCCGGTA ACTTATGGGT GACGGGCGGG GGCGGAGTGT TGGTTCTTTC AGCAACGGGC
GAAACACTGG GTTTTATAAA AATCGGGGTG GCTACGGCAA ACTGTGCCTG GGGAGATGAT
GGGTCGACAC TTTACATCAC CTCCGACATG TATCTCTGCC GATTGAGGAC TATGGCTAAA
GGATGGTGA
|
|---|
| Protein sequence | MNLNSILLVG LLSVIYCPLM AQPTPFPTIG QIVRVDPRLD KLISAEANVE VLANGFVWTE
GPIWVKDQGF LLFSDVPQNT IFKWTEKDGV TPFLKPSGYT GVGAYSDEPG SNGLTIDRQG
RLIACEHGDR RVTAMPLNGT GGKRTLADNV NGKRFNSPND VVAHSNGSYY FTDPPYGMPK
KEKDPGKETD GWGVYRIAPE RAGVPGAVSI VVSDLNRPNG IALSPDEKTL YVAQSDPLRP
LVMAYPLQAD GSVGKGREVF GAVGMKKLGL EGGFDGMKVD RAGNLWVTGG GGVLVLSATG
ETLGFIKIGV ATANCAWGDD GSTLYITSDM YLCRLRTMAK GW
|
|---|
| |