Gene Slin_3201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3201 
Symbol 
ID8726954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3877340 
End bp3878620 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content49% 
IMG OID 
Productcell cycle protein 
Protein accessionYP_003388011 
Protein GI284038081 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000354109 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.150861 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCCGTA ACAACGACCC ATTTTCACAA AACATTGACT GGCTCACGCT CCTGCTCTAC 
CTGGGCTGTG TAACAATGGG CTGGCTCAAT GTCTATGCCG CCGTTTATAG TCCCGAAGAT
CATACCAGCC TGTTCGATAT GTCGACCAAT GCCGGGAAGC AGATGATGTG GATTGGCACA
ACGGTAATTC TGATTATCTG TATTCTGGTT GTCAACCACA CGTTTTTCGA CACCTTTGCC
TTTGTCTTTT ATGGCTTTAT GATCCTGGTG TTGATTCTGG TTCTATTCGC CGGAACGAAC
ATCAACGGGT CGAGGTCGTG GTTTAGATTT GGAGCATTTC AGATTCAACC CGCCGAATTC
GCAAAGGTCG CCACCGCACT GGCGCTGGCT AAATACCTGG ATGTGCCCGG AACTAACCTG
ACCAGGCAAA AGGACCTGAT GTATATTGGG GGCATTATTG TTCTTCCCTG TCTGTTAATT
CTAGCCTCCA ACGAAACCGG TTCAACGCTT GTCTTTGCGT CGTTTACAAT CATGCTGTAC
CGGGAGGGGC TGCCAAGCTG GATTCCGGCA GTGGGTATAA CGGCGGCTGC ACTGTTTGTG
CTGGCCCTGA TTTTCCCCAA GCTGTATATT TTTATTGGTA TCGGTGCCTT GTTGGGACTG
ATTATTATGT TGATGCCCCG TTATAACCGC ACAATGGCCA ATTTACTGGC AATCGGGCTG
GTAGGAGTTG TGATGATTGG CTATGTTACC GGGGTCGATT TCTTTGTCAA TAACGTTCTG
CAAAAGCACC AGCGCAACCG GATAAAAGTG CTTGTCGACC CAAAAGTCGA TCCGCTTGGC
GTAGGCTGGA ACGTAACGCA GGCCAAAATT GCCATCGGTT CCGGTCGACT TCAGGGCAAG
GGTTTCCTGG AAGGTACACA AACCAAGTTT GACTTCGTGC CTGAGCAAAG CACCGATTTT
ATCTTTTGCA CGATCGGCGA AGAGCACGGC TTTATTGGCG GTCTTGTCGT TATTGCTCTA
TTCGTTGGGT TGGTGTCACG GATCGTTATT CTGGCCGAAA AACAACGAAC AAAGTTTGCC
AGGGTGTACG GCTACTGTGT CGCCGGGATC ATATTCTTTC ATGTCATGGT AAATATCGGA
ATGACGATTG GCTTGATGCC TGTAATCGGC ATTCCCCTTC CATTTTTCAG TTACGGAGGC
TCTTCGCTCT GGTCGTTTTC TATTCTATTA TTTATTTTTC TGAAACTTGA CTCCCGCAGA
ACGGCACTGA CGAGACGGTA A
 
Protein sequence
MARNNDPFSQ NIDWLTLLLY LGCVTMGWLN VYAAVYSPED HTSLFDMSTN AGKQMMWIGT 
TVILIICILV VNHTFFDTFA FVFYGFMILV LILVLFAGTN INGSRSWFRF GAFQIQPAEF
AKVATALALA KYLDVPGTNL TRQKDLMYIG GIIVLPCLLI LASNETGSTL VFASFTIMLY
REGLPSWIPA VGITAAALFV LALIFPKLYI FIGIGALLGL IIMLMPRYNR TMANLLAIGL
VGVVMIGYVT GVDFFVNNVL QKHQRNRIKV LVDPKVDPLG VGWNVTQAKI AIGSGRLQGK
GFLEGTQTKF DFVPEQSTDF IFCTIGEEHG FIGGLVVIAL FVGLVSRIVI LAEKQRTKFA
RVYGYCVAGI IFFHVMVNIG MTIGLMPVIG IPLPFFSYGG SSLWSFSILL FIFLKLDSRR
TALTRR