Gene Slin_3197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3197 
Symbol 
ID8726950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3870882 
End bp3871457 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content45% 
IMG OID 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_003388007 
Protein GI284038077 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.229687 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.39078 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGAA ACAACTTTCT GAAAGCCGGT TTGGCAGCAA CTGCTTTTCT AGCTTCCCCT 
TTCTTATGGG CGGCAGAAAC CCTTAAAAAC CGCCGGGTTG ATAAAGGGTT TAAAGTCGAT
GCAGGGAAGG ATCGATTTAA TCATGCCATT TCCCTTTTTG ATGGAGATAC CTTTATGACG
AAGGTATCTA CTAAAGACAC CAATGGGGAT CTGTACGTTT ATGAATCCAG TCGTGTTAAA
GAAGGCGGTC CCGCTCTTCA CACCCACTTT GATCAGGATG AGATGTGGTA TGTGCTGGAA
GGGGAATTTT TAATTAAAGT TGGTGATGTA ATCCATCAGG CGAAAGCTGG TGATACTGTG
TTTGGCCCGC GAAACGTACC ACATTGTTTT GCCAAAGTTG GCTCTGGTGA TGGCCGGTTG
TTAATGACTT TCCAGCCAGC GGGTAAAATG GAAGAGTTTT TCCAAAAGGT AAGCGAAGGG
GCGCTCAAAA CGATGAGCGA AGCAGAACAG GACAAGTTTC GAGAGGCTCA CGGATTTAAA
CGAGTAGGCC CTCCAATCAA TCAGTTAAAG AAGTAG
 
Protein sequence
MQRNNFLKAG LAATAFLASP FLWAAETLKN RRVDKGFKVD AGKDRFNHAI SLFDGDTFMT 
KVSTKDTNGD LYVYESSRVK EGGPALHTHF DQDEMWYVLE GEFLIKVGDV IHQAKAGDTV
FGPRNVPHCF AKVGSGDGRL LMTFQPAGKM EEFFQKVSEG ALKTMSEAEQ DKFREAHGFK
RVGPPINQLK K