Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3197 |
Symbol | |
ID | 8726950 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 3870882 |
End bp | 3871457 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | |
Product | Cupin 2 conserved barrel domain protein |
Protein accession | YP_003388007 |
Protein GI | 284038077 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.229687 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.39078 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACGAA ACAACTTTCT GAAAGCCGGT TTGGCAGCAA CTGCTTTTCT AGCTTCCCCT TTCTTATGGG CGGCAGAAAC CCTTAAAAAC CGCCGGGTTG ATAAAGGGTT TAAAGTCGAT GCAGGGAAGG ATCGATTTAA TCATGCCATT TCCCTTTTTG ATGGAGATAC CTTTATGACG AAGGTATCTA CTAAAGACAC CAATGGGGAT CTGTACGTTT ATGAATCCAG TCGTGTTAAA GAAGGCGGTC CCGCTCTTCA CACCCACTTT GATCAGGATG AGATGTGGTA TGTGCTGGAA GGGGAATTTT TAATTAAAGT TGGTGATGTA ATCCATCAGG CGAAAGCTGG TGATACTGTG TTTGGCCCGC GAAACGTACC ACATTGTTTT GCCAAAGTTG GCTCTGGTGA TGGCCGGTTG TTAATGACTT TCCAGCCAGC GGGTAAAATG GAAGAGTTTT TCCAAAAGGT AAGCGAAGGG GCGCTCAAAA CGATGAGCGA AGCAGAACAG GACAAGTTTC GAGAGGCTCA CGGATTTAAA CGAGTAGGCC CTCCAATCAA TCAGTTAAAG AAGTAG
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Protein sequence | MQRNNFLKAG LAATAFLASP FLWAAETLKN RRVDKGFKVD AGKDRFNHAI SLFDGDTFMT KVSTKDTNGD LYVYESSRVK EGGPALHTHF DQDEMWYVLE GEFLIKVGDV IHQAKAGDTV FGPRNVPHCF AKVGSGDGRL LMTFQPAGKM EEFFQKVSEG ALKTMSEAEQ DKFREAHGFK RVGPPINQLK K
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