Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3194 |
Symbol | |
ID | 8726947 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 3868589 |
End bp | 3869597 |
Gene Length | 1009 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | Transposase and inactivated derivatives-like protein |
Protein accession | YP_003388004 |
Protein GI | 284038074 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.329785 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.95416 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAACT ACAAACAATC TGATTACGAA GCCCTTCGCC GACGCTGTAT TGAACTCAGT CAGGTAGGAT GGAAACAAGC AGCTATTGCT CAGGTGTTTG GCCTAACTCA GCCTTGGGTG AGTCGGACAC TTAAGAAGTA CAACCAGCAA GGTTTGACCG CCTTGCAAGA AGGGAAGCGA ACCGGAGCAC CACCCCGTTT GTCGGCTCAG CAACTGGATC TACTCGTGAT TGAACTCAAC AAAGGGGCGG AACATCATGG ATTTAGTGGA GCCATCTGGA CCCGTCCCCG AGTTAATGAA GTCATTAAGA AGCTCTTTGG TGTCAGCTAT GACCCTTCTC AGGTAGGCCG TATCCTCAAG AAAGTAGGCT GGAGCCGACA GTTGCCGCAA CGTAAAGCCA GTCAACAGGA CGCTCAGGCA GTTACTCAGT GGCGCAGCGA ACGCTTACCC GAACTTAAAA AAAGCTAAAG CCGAGGGGCG CGTTATCTTA TATATTGATG AATCAGCGTG TTATCTATTG CCTTTTGTGG CCCACACTTG GGCACCTTGC GGACAGACAC CGGTCTTAAT GGAGCAAGCG GGGCGGACTC ATTTGAGCTT AATTGCGGCC ATTGCTGCGA ACGGTCAAAT TTATGTGGCA GGTCAAAACC AGGCATTCAC TAGTGAAGAT ATAGTATGGT TTTTAAAACT ACTCTGTGGG CGTTATCGCA AACGGAACCT GCTGATTATT TGGGATGGCG CAGCAATCCA TCGTAGCAAC GTCGTTAAAG AGTTACTTCG TGAACGCCTT GGCCGAATGC ATCTGGAACG CTTACCCGCT TATAGTCCGG AGCTAAATCC AGTTGAACTG CTATGGAGTC AATTGAAAAG AAACTTAAAA AACAAAGCGT TCACAAGCTT GGACGAACTG ACTGTAGCTG TTCTTGAGCA AACCAAGCGA CTAGAGAAGG ACCCTAAATC AGTAAAAGCC TTCTTCAATA AAAAGGAAAT AGCGTTTATT ACAGACTAA
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Protein sequence | MANYKQSDYE ALRRRCIELS QVGWKQAAIA QVFGLTQPWV SRTLKKYNQQ GLTALQEGKR TGAPPRLSAQ QLDLLVIELN KGAEHHGFSG AIWTRPRVNE VIKKLFGVSY DPSQVGRILK KVGWSRQLPQ RKASQQDAQA VTQWRSERLP ELKKKAKAEG RVILYIDESA CYLLPFVAHT WAPCGQTPVL MEQAGRTHLS LIAAIAANGQ IYVAGQNQAF TSEDIVWFLK LLCGRYRKRN LLIIWDGAAI HRSNVVKELL RERLGRMHLE RLPAYSPELN PVELLWSQLK RNLKNKAFTS LDELTVAVLE QTKRLEKDPK SVKAFFNKKE IAFITD
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