Gene Slin_3180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3180 
Symbol 
ID8726933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3855657 
End bp3856694 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content53% 
IMG OID 
Productaldo/keto reductase 
Protein accessionYP_003387990 
Protein GI284038060 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.877105 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTATC GGCAATTAGG TGCATCGGGA TTACATGTTC CGGTGCTGAG TTTTGGCACC 
GCCACCTTCG GTGGTGGGAA TGATTTTTTT AAAGCCTGGG GAAGTACGCA GACCGACGAA
GCGGCCCGTT TAGTTAATCT TTGCCTGGAT GCTGGAGTCA ACCTGTTCGA TACCGCCGAT
GTTTATTCGG ACGGGCTATC GGAAGAGATT CTGGGTAAAG CTTTGCAGGG ATTGCGGGAC
AAAGTACTGA TTTCGACCAA AGCTACCTTT ACCTTTGGCG AAGGGCCTAA CAACCAGGGC
TCATCGCGTT TTCACCTGAT ACGGCAGTGC GAAAGCAGTC TCAAACGGCT GAAAACCGAT
TACATCGACA TCTATCACAT GCACGGGTTT GATGGCGTAA CGCCAGTCGA AGAAACCTTA
CGCACCCTCG ATGATCTGGT TCAGAGCGGT AAAGTACGGT ACATTGCCTG CTCTAATTTT
TCGGGCTGGC ATTTGATGAA ATCGCTGGCC GTTTCCGAAA AACAGGGTTG GAATCGCTAT
GTCGGGCATC AGGTTTATTA TTCGCTGGTG AACCGGGAGT ATGAGTGGGA ACTGATGCCG
CTGGGTATCG ACCAGAAAGT GGGCGGCATT ATCTGGAGTC CGCTGGCAGC TGGCCGACTG
GGTGGCAAAT ATCGCCGAAA CCAGCCCATT CCGCCCGATA GCCGCGTGGC GCAGGGAGGA
AGTCCCGTAC CCGCCTTTGT CATTCCCGAC GAATTATTTT ACAACATCAT TGATGTGCTG
GACGAGCTGG CTGAAGAAAC CGGCAAAACG GTGGCTCAGA TTTCCCTCAA CTGGCTGTTG
CAGCGCCCAA CCGTTTCGAC CCTTGTGATC GGCGCACGGA ACGAGGAGCA GCTGAAACAA
AACCTCGGGG CCGTTGGCTG GAGCCTCACC ACTGAGCAGG TAAAACGACT GGATGCAGCC
AGTGAAGTGC CAACTATCTA TCCCTATTGG CATCAGCGGC AAAACCTGAC ACTGAACCCC
CTGCCGAAGT TTTATTAA
 
Protein sequence
MDYRQLGASG LHVPVLSFGT ATFGGGNDFF KAWGSTQTDE AARLVNLCLD AGVNLFDTAD 
VYSDGLSEEI LGKALQGLRD KVLISTKATF TFGEGPNNQG SSRFHLIRQC ESSLKRLKTD
YIDIYHMHGF DGVTPVEETL RTLDDLVQSG KVRYIACSNF SGWHLMKSLA VSEKQGWNRY
VGHQVYYSLV NREYEWELMP LGIDQKVGGI IWSPLAAGRL GGKYRRNQPI PPDSRVAQGG
SPVPAFVIPD ELFYNIIDVL DELAEETGKT VAQISLNWLL QRPTVSTLVI GARNEEQLKQ
NLGAVGWSLT TEQVKRLDAA SEVPTIYPYW HQRQNLTLNP LPKFY