| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3177 |
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| Symbol | |
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| ID | 8726930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 3850061 |
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| End bp | 3854449 |
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| Gene Length | 4389 bp |
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| Protein Length | 1462 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | heavy metal efflux pump, CzcA family |
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| Protein accession | YP_003387987 |
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| Protein GI | 284038057 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.452268 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAAACG CAATCATCCA ATTCTCCATT CGCAACAAGC TGATTATCGG CCTTTTTACC
TTCGCCTTAG TGCTCTGGGG CGGCTGGTCG GCCACGCAGT TGCCAATTGA TGCCGTTCCT
GACATCACCA ATAATCAGGT ACAGGTCATT ACCAGTAGCC CGTCGCTGGC GGCCGAAGAC
ATCGAGCGTC TCGTTACGTT TCCGGTTGAA GTAAGTTTGT CCAACATTCC GGATCTGGTC
GAAATTCGCT CGTTTTCACG ATTTGGCCTG TCTATCGTCA CCGTTGTTTT CAGCGATGCG
ACCGATGTTT ACTGGGCCCG GCAACAAATT GCCGAGCGGC TGCAAAACGT AATTGGCCAG
ATTCCGCCGG GGGTAGGCAC GCCCGTTATG GCTCCTGTAA CGACGGGGCT GGGCGAGATT
TTCCAATACA CGGTTGTTCC GAAGAAAGGT TACGAGTCGA AATACTCACT AACCGAACTG
CGCACCATAC AGGACTGGAC CATCCGGCGT GGGTTATTAG GAACGCCCGG CGTGGCCGAT
GTCAGTGGAT TCGGGGGGCT GATGAAGCAG TACGAAATTG CCGTTGACCC CGACCGGCTT
CGTAGCATGG GCATCACCAT CACCGAAATT TTTACCGCCC TTCAGCAAAA TAATCAGAAT
ACCGGGGGCG CTTACATCGA CAAAAAACCA AATGCGTTCT TCATTCGCTC CGACGGCCTG
ATTAACTCCA CAGATGACAT TGCCGACATT GTAATCCACC TGAACGACCA GGGATTACCC
GTTCGGGTGC GCGATGTGGC GCAGGTGACT ATGGGTTCGG CGGTACGCTA CGGGGCCGTA
ACCCGCAATG GTGAAGGCGA AACGGTGGGA GCCATCGTGA TGATGATCAA AGGCGAGAAC
TCGTCAGCGG TTATCAAGCG GGTTAAGACA AAAATTGCCG AAATTCAGAA AACGCTTCCC
GAAGGCGTTC AGATCGTACC GTTTCTGGAC CGTACCAAAA TGGTGAACAG CGCCATTGGT
ACCGTTGAAC GAAACCTGCT GGAAGGAGCC GCCATCGTCA TTTTTGTGCT GGTTCTGCTG
CTGGGTAATT TCCGGGCGGG CTTTGTGGTG GCATCGGTCA TTCCGTTAGC CCTGCTGTTT
GCCATTGCCA TGATGAACCT GTTTGGCGTG TCGGGTAACC TGATGAGCCT GGGGGCCATT
GATTTCGGCC TTATCGTAGA TGGAGCCGTC ATTATCGTTG AGGCTACTCT CCATCACATC
ATGTTGCGTA ACCGCGACAA AACGCTGACG CAGAGCGAAA TGGATGAAGA GGTGTTTCTG
TCGGCAGCCC GGATTCGTTC ATCGGCGGCT TTTGGTGAAA TCATTATTTT GATCGTTTAC
CTGCCTATTC TGGCTCTGTC GGGCATTGAG GGGAAGATGT TCCGGCCCAT GGCCCTAACC
GTAGCCTTCG CTATTCTGGG GGCATTTATT CTGTCGATCA CCTACGTACC CATGATCTCG
GCCCTGATGC TGAGCAAGAA GATCGTGCAT AAAGAGACGC TGTCGGATCG GCTCATGAAA
CGGATTTACC GCGTTTACGA ACCGGCCCTG CTAACTGCCC TGAAACATCG GTTCCTCATT
CTGGCCGGTG CTGTCTCGTT GCTGGTGGTT ACCGTGTTTC TGTTTGGCCG GATGGGCGGT
GAGTTTATCC CGCAACTGGA CGAGGGCGAC TTTGCTGTCG ATACCCGAAC GCTGACGGGT
AGCTCCCTTT CCGAAACCGT AGACGCCACG CTGAAAGCCG AACGGATTCT GCTCAAACAG
TTTCCGGAAG TAGAGCAGGT GGTGGCCAAG ATCGGGTCCG GCGAAATCCC GACCGACCCG
ATGGCAATCG AAGCCGCCGA CCAGATGGTT ATTCTTAAAC CAAAAGACGA ATGGACATCG
GCCAGGACCC GCGATGAACT CGCCACCAAA ATGTCGGAAG CATTATCCGT TATTCCCGGT
GTAACCTTCG GGTTTCAGCA GCCGGTACAG ATGCGATTCA ATGAGTTGAT GACCGGTGCG
CGCCAGGATG TGGCCCTGAA AATTTACGGC GATGACCTGA ATCAACTCGC CAAACAGGCC
GAGAATGTAG GGCGTATCAT CCGGACGATC GATGGGGCGC AGGATTTGTA CGTCGAACAG
GTGGGCGGTC TATCCCAGAT ACTTATCAAG CTCGACCGGG CGCAGATCGC CAAATTTGGT
CTGAACGTGT CGGATGTGAA CCGGGTTATC AACACCGCCT TTGCCGGTCA GTCGGCGGGG
TTGGTTTTTG AAGGGGAGAA ACGATTCGAC CTGGTGGTTC GACTGGCTGC CGAGAAGCGG
CAGAGCATTG AGGATATTCA GAATATGTAC ATTTCCGTAC CTACGGGCGG GCAGATTCCG
TTGAGCCAGG TGGCTTCGGT CACGATGGAG CAGGCCCCTA ACCAGATTCA GCGCGATAAC
ACCCATCGGC GTATTACGCT GGGTTTCAAC GTACGGGGGC GCGATGTGGA AAGTATTGTG
GCTGAACTAC AGCAGAAAGT AGGGCAGCAA ATCAAGTTTC CGCCGGGCTA TTACATAACC
TACGGCGGGC AGTTTCAGAA TCTGGTCGAT GCCAAGAAAC GACTGACGAT CGCTGTTCCC
TTAGCACTAG GGCTGATTTT TGCCCTGCTC TTTTTTACGT TCAACTCCGT TCGGCAGAGC
TTGCTCATTT TCATGGCCAT CCCAATGGCG GCTATCGGCG GAGTTTTCGC CCTGTTGCTC
CGCGACATGC CGTTCAGTAT TTCGGCAGGG GTGGGGTTCA TTGCGCTGTT TGGGGTATCG
GTGCTAAACG GCATTGTACT GATTGCCGAG TTCAACCGAC TCCGGCATGA GGATGGGTTG
ACAGACATGG TCGAAATTAT TCGGCAGGGA ACCGAAGTGC GGCTGCGCCC CGTCATCATG
ACCGCCCTGG TTGCGTCATT CGGCTTTATT CCGATGGCTA TTTCCAATTC GGCAGGAGCA
GAAGTGCAGA AACCACTAGC CACTGTTGTG ATTGGGGGAC TGCTCACCGC AACGCTGTTA
ACACTCATTG TATTACCCAT ACTCTATTCG CTTATGGAAA AGAAAGCTGT TGAAAACGAA
GCGAACGCGG CCCGAAAGTC GGCTACGGTG GCTACTATAC TCCTGCTTAC ACTCCTGGCT
ATGGGTGGTA ACGTACAGGC GCAGGGCACT CAAATGCAGG TTGTTACGCT GGACCAGGCC
CTTCAGCAGG CGGGCACACG CAACGCCCAG CTACAGATTG CCGGGCTGGG GGTTAGTCAG
CAGCAAGCAC TCCGGCGAAC GGCCTATGAT GCCGGGCGAC TGTCGGCTAC GGCCATGCTG
GGTCAGTACA ACAGCCGCCG GTTCGACAAC AACCTGACCG TTACGCAAAC GATCCCCAAT
CCAACGCTCA TGCGCCGACT AGCAACGCTG AACGATGAGA CCGTCGCCAG TCGGGAGGTT
GGCGTGTTGG TAACCCGGAA TGACGTTCAG TATCAGGTGA AGTCGGCCTA TTATGACCTG
GTGTATTTGC AGCAGAAAAG TCGACTGTTC CGGCAGCAGG ATACGTTGCT GACCGAGTTT
GTTCAGGCCG CTAATCTGCG GTTCAAAACG GGGGAGACGG GTAGCCTGGA AAAGGCAACC
GCCGAAAGCC AACTGGCCGA CCAGCGCGTA AGGCTGGCTC AGAATGAAGC CAGTCGGATT
GGCGTACGGA CGCGCTTGCA AACGCTACTC TACAGTTCCG CGCCCGTCGA TGTGCCCGAA
CAGGCGTTAA CCAAACTGCC TTTGCTCATT CCCACCGACA CGGCTAGTCT GAACCGGAAT
CCGCTGCTTC GACAGTTGAG CCAGCAGATT CGCGTGGCCC AGCAAGCCCG ACTTGTGGAG
CAAGCCCGGC TCAAGCCTGA TTTTCTGGTG GGGCTATTTT CACAGACCCT CATTGGTAAT
CAGTTGATTA ACGGGCAGGA GTTGTATTTT GGACCGGGTT ACCGCTTCAA CGGCGGGCAG
CTCGGCATTT CGGTGCCGCT GCTGGGGCAA GCACAAAAAG CCCGGATCAA TGCCGCCCGC
ATTGGTGAGC AACTGGCGCA GACGGAGTTG CAGCAGCAGC AGTTTGCGCT GAGTCAGCAG
ATGACGCAGG CCGTGCGGCA GTTTGAGCAA TACCGCGACG CACTAACCTA TTATGAGCAG
AATGGACTGG CACAGGCAAC CCTCATTCAA ACCAATGCCC GGCGAGCCTT TAGCAGTGGC
GACATTGGCT ATGTCGAATT CTCGCTGGCA CTTCAGCAGG CCCTAACCAT CCGTTCCAAT
TATGTCGACC TGCTTAACGA CTATAACCAA TCGGTTCTTT ACATCAATTA TGTACTGGGT
AATCCCTAG
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| Protein sequence | MLNAIIQFSI RNKLIIGLFT FALVLWGGWS ATQLPIDAVP DITNNQVQVI TSSPSLAAED
IERLVTFPVE VSLSNIPDLV EIRSFSRFGL SIVTVVFSDA TDVYWARQQI AERLQNVIGQ
IPPGVGTPVM APVTTGLGEI FQYTVVPKKG YESKYSLTEL RTIQDWTIRR GLLGTPGVAD
VSGFGGLMKQ YEIAVDPDRL RSMGITITEI FTALQQNNQN TGGAYIDKKP NAFFIRSDGL
INSTDDIADI VIHLNDQGLP VRVRDVAQVT MGSAVRYGAV TRNGEGETVG AIVMMIKGEN
SSAVIKRVKT KIAEIQKTLP EGVQIVPFLD RTKMVNSAIG TVERNLLEGA AIVIFVLVLL
LGNFRAGFVV ASVIPLALLF AIAMMNLFGV SGNLMSLGAI DFGLIVDGAV IIVEATLHHI
MLRNRDKTLT QSEMDEEVFL SAARIRSSAA FGEIIILIVY LPILALSGIE GKMFRPMALT
VAFAILGAFI LSITYVPMIS ALMLSKKIVH KETLSDRLMK RIYRVYEPAL LTALKHRFLI
LAGAVSLLVV TVFLFGRMGG EFIPQLDEGD FAVDTRTLTG SSLSETVDAT LKAERILLKQ
FPEVEQVVAK IGSGEIPTDP MAIEAADQMV ILKPKDEWTS ARTRDELATK MSEALSVIPG
VTFGFQQPVQ MRFNELMTGA RQDVALKIYG DDLNQLAKQA ENVGRIIRTI DGAQDLYVEQ
VGGLSQILIK LDRAQIAKFG LNVSDVNRVI NTAFAGQSAG LVFEGEKRFD LVVRLAAEKR
QSIEDIQNMY ISVPTGGQIP LSQVASVTME QAPNQIQRDN THRRITLGFN VRGRDVESIV
AELQQKVGQQ IKFPPGYYIT YGGQFQNLVD AKKRLTIAVP LALGLIFALL FFTFNSVRQS
LLIFMAIPMA AIGGVFALLL RDMPFSISAG VGFIALFGVS VLNGIVLIAE FNRLRHEDGL
TDMVEIIRQG TEVRLRPVIM TALVASFGFI PMAISNSAGA EVQKPLATVV IGGLLTATLL
TLIVLPILYS LMEKKAVENE ANAARKSATV ATILLLTLLA MGGNVQAQGT QMQVVTLDQA
LQQAGTRNAQ LQIAGLGVSQ QQALRRTAYD AGRLSATAML GQYNSRRFDN NLTVTQTIPN
PTLMRRLATL NDETVASREV GVLVTRNDVQ YQVKSAYYDL VYLQQKSRLF RQQDTLLTEF
VQAANLRFKT GETGSLEKAT AESQLADQRV RLAQNEASRI GVRTRLQTLL YSSAPVDVPE
QALTKLPLLI PTDTASLNRN PLLRQLSQQI RVAQQARLVE QARLKPDFLV GLFSQTLIGN
QLINGQELYF GPGYRFNGGQ LGISVPLLGQ AQKARINAAR IGEQLAQTEL QQQQFALSQQ
MTQAVRQFEQ YRDALTYYEQ NGLAQATLIQ TNARRAFSSG DIGYVEFSLA LQQALTIRSN
YVDLLNDYNQ SVLYINYVLG NP
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