| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3176 |
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| Symbol | |
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| ID | 8726929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 3848800 |
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| End bp | 3850080 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003387986 |
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| Protein GI | 284038056 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACTGGG TAATCCCTAG CCCCACCGTT CTTCACAAGA CCTCTATGCA TTCGTCTATA
AACTTACGTT ATTCCCTCCG TGTGGCCGTT TTAGCAACCA GTGTTCTGGT TGGGGCTGTT
GGCTGCCAGT CCGGTAGTTC GTCGGAAGAA AACAAATCCA CGCCTAATCT CAACGAACAG
GCGTCTGCCA AAGACACAAG CGAAAAAGAA GCCCCCGGCG GGCCGGTGAT GGTGGAATTG
AGCCAGGCTC AGTACGACAT GGCGGCTATC CAGTTGGGGC AACCAGCTCT CCGGCCATTG
AGTACCACTC TGAAAGTAAA TGGATCGCTC GATGTACCTG CCCAAAACCT TGTGTCGGTA
TCTGTGCCGG TGGGTGGGTA CATTCGCCAG ATTCAGCTTG AACCGGGTAT GCGTATCCGA
AAAGGGCAGA CGCTCGTGGT ACTCGAAAAT CCTGAATTCG TTCAGCTTCA GCAGGATTAT
CTCGATACAA AAGCCAAACT GGAATACGCC GATCTGGAGT TTGCCCGTCA GCAGGAGCTG
AGCCGGGATA ATGTCAACGC ATTGAAAGTT TTCCAGCAGG TGCGGGCTAA TCGGCAGAGT
TTACAGGCGC AGTTGGCGGG CATGGCGCAG CGGTTAACCA TCCTTCGCAT AAATCCCGCT
ACGCTTACTC CCGAACGAAT GACCCGCACT ATCAGCGTAC CCGCTCCTGT GTCGGGTTAT
GTTACGGATG TGCCCACAAA CAATGGCCGG TTCGTGAATC CGTCCGACGT GCTGGTGCAG
ATCACGAACG TAGATCACCT GCATGTTCGC CTGAGTATTT TCGAGAAAGA TATCAGCCGT
ATTCATTCGG GTCAAATGGT TCGTTTCGGT ATGGGTGGCG ATGCCACGCT GGAACACCAG
GGGACGATTT TTCTGATCGG TAAATCTATT GCGGCTGATC GTACCATTTC GGTACTGGCT
CACCCAGAAG GCGATGCCAG TCACTATATT CCGGGCGGAT ATATTACGGC GCAAGTCGAT
GTGAAAACCC AGCCTTTGCC CGCTCTGCCC GAAACGGCGG TTATCGGTTT TGGTGGGAAA
TCATACGTCT ATGTGCTTGA TCGGAAGGAT GCCAAAGCCG CTTTGTATCA TTTCAGGCAA
GTGGAAATTA AAACGGGGGT ACGGGAAAAC GGCTATATCG CCGTTACGCT GCCTGTCGAT
CTAGATCCGG CAAAAACACC CATCGTTATC AAAGGCGGCT ATGGACTATT GGCTAAGCTG
AATAACAGTG AAGAGGAATA G
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| Protein sequence | MYWVIPSPTV LHKTSMHSSI NLRYSLRVAV LATSVLVGAV GCQSGSSSEE NKSTPNLNEQ
ASAKDTSEKE APGGPVMVEL SQAQYDMAAI QLGQPALRPL STTLKVNGSL DVPAQNLVSV
SVPVGGYIRQ IQLEPGMRIR KGQTLVVLEN PEFVQLQQDY LDTKAKLEYA DLEFARQQEL
SRDNVNALKV FQQVRANRQS LQAQLAGMAQ RLTILRINPA TLTPERMTRT ISVPAPVSGY
VTDVPTNNGR FVNPSDVLVQ ITNVDHLHVR LSIFEKDISR IHSGQMVRFG MGGDATLEHQ
GTIFLIGKSI AADRTISVLA HPEGDASHYI PGGYITAQVD VKTQPLPALP ETAVIGFGGK
SYVYVLDRKD AKAALYHFRQ VEIKTGVREN GYIAVTLPVD LDPAKTPIVI KGGYGLLAKL
NNSEEE
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