Gene Slin_3159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3159 
Symbol 
ID8726912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3830135 
End bp3830674 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content53% 
IMG OID 
ProductUracil phosphoribosyltransferase 
Protein accessionYP_003387969 
Protein GI284038039 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAAC AGCGTCTAAT ACTGTCCAGT CCACTACTCG AAATTGTTGT GAGCCGACTG 
GCGCAGCAAC TCATTGAGAA TTACCAGGAT TTCGCGGATA CCGTTATTCT CGGTATGCAG
CCGAGGGGGA TTTATTTTGC CGAACGCGTA GCCCGCGAAC TGAATCGCAT ACTCGGGTAT
GATGTTCCGC TTGGGTATCT GGACGCGACA TTTTACCGGG ATGATTTCCG ACGGCGTGAT
ACACCCTTAC GGGCCAATAC CACCAACGTG CCTTTTATTA TCGAGAACAA ACGCGTTATT
CTTATCGACG ACGTGCTGGC AACCGGCCGA ATGGTGCGGG CCGCCCTCGA CGCGATGACC
GCCTTTGGCC GACCCCGTAA AGTAGAACTC CTGGTGCTAA TTGATCGTCG GTATAACCGC
GACCTGCCCA TCAAGCCCGA TTATACCGGC AAACGGGTAA ATACGCTGGA GTCGCAGCAG
GTTTTGGTCG AATGGACTGA GCAGGGAGCT GAGGCCGATC GTATCTGGTT AGTAGGTTAA
 
Protein sequence
MNQQRLILSS PLLEIVVSRL AQQLIENYQD FADTVILGMQ PRGIYFAERV ARELNRILGY 
DVPLGYLDAT FYRDDFRRRD TPLRANTTNV PFIIENKRVI LIDDVLATGR MVRAALDAMT
AFGRPRKVEL LVLIDRRYNR DLPIKPDYTG KRVNTLESQQ VLVEWTEQGA EADRIWLVG