Gene Slin_3136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3136 
Symbol 
ID8726889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3804315 
End bp3805145 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content52% 
IMG OID 
ProductRNA methyltransferase, TrmH family, group 3 
Protein accessionYP_003387946 
Protein GI284038016 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAACC GGCGCAATCC GCGAGTAAAT CGCCCCAATT ATAAGCCACG CCCAGGAGGG 
TCAAAGCCAC AGTACCAGCC TCAGCCCGAT GAGATGGTGT TTGGTATTCA GTCCGTTATC
GAGACGCTGA AATCCGATCA GCAGATTGAT AAACTCTACA TGGAGAAGGG ACTGAGCAAT
CCCGATATTC AAAATCTGGC TTTTCAGAAG CGCGTTACCA TCCAGCGCGT TCCCGTTGAG
CGTCTCGACC GGTTTACCCG AAAGAACCAC CAGGGCGTAG TTTGTCTAAT CGCCCAGGTG
CAATACGTTA AACTGTCGAA TGTAATCGCC GACGTGTTTG AGCGGGGCGA GGTTCCTTTC
TTTCTGTTGC TGGACCGCAT TACCGATGTC CGTAATTTCG GTGCTATCGC TCGTACGGCA
GAGTGTACCG GTATTCAGTG CATTGTCATT CCGGGCCGGG GAGCAGCCGC TATCAACTCC
GATGCCATGA AAACATCGTC CGGAGCGTTG AACCACATTT CCGTTTGCCG GGAACCTGAT
CTGACTGAAA CCGTAAAGTA TTTACAAGAG TCGGGTATCA CGGTGGTGGC CTGTACTGAA
AAATCGGCCC GTGACCTTTA CGAACGGACC ACTGATCTGA CCGGTCCTAT GGCAATCATC
ATGGGCTCAG AAGAGGACGG TATCTCGCCC GAGCTGCTTC GTATGGTTGA TACACACGTT
AAGATTCCGC TCCTGGGAGC CGTTGGTTCA TTGAACGTGT CGGTAGCAAC CGGCGTGATT
CTATACGAAG CCGTACGACA GCGGAGCTTG CCTGTGAGTT CAGTCCAGTA A
 
Protein sequence
MENRRNPRVN RPNYKPRPGG SKPQYQPQPD EMVFGIQSVI ETLKSDQQID KLYMEKGLSN 
PDIQNLAFQK RVTIQRVPVE RLDRFTRKNH QGVVCLIAQV QYVKLSNVIA DVFERGEVPF
FLLLDRITDV RNFGAIARTA ECTGIQCIVI PGRGAAAINS DAMKTSSGAL NHISVCREPD
LTETVKYLQE SGITVVACTE KSARDLYERT TDLTGPMAII MGSEEDGISP ELLRMVDTHV
KIPLLGAVGS LNVSVATGVI LYEAVRQRSL PVSSVQ