Gene Slin_3127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3127 
Symbol 
ID8726880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3796324 
End bp3797511 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content51% 
IMG OID 
ProductPhosphoglycerate kinase 
Protein accessionYP_003387937 
Protein GI284038007 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCG TAGATACCTA CAATTTTGCC GGTAAGAAAG CCCTCGTTCG GGTAGACTTC 
AACGTGCCAC TCGACAAAGA GTACAACATT ACGGATGATA CCCGCATTAA GGCAACCATC
CCAACCGTTC TGAAGATCGT GAACGACGGT GGTTCGGCCA TTCTGATGTC ACACCTCGGC
CGCCCGAAAG GTGGTCCCGA AGAAAAATAT TCGCTCAAGC ACATATTGCC TGCCCTGAAA
GAAGCTTTTG GCCGCGACGT GAAATTCGCA GATGATTGCA TTGGTCAGTC GGCAACGGAT
TTAGCGGCCA GCCTGCAACC CGGCGAAATC CTGCTGCTCG AAAACCTGCG TTTCTACAAA
GAGGAAGAGA AAGGTGATGT GGCCTTTGCC GAAAAGCTTG CCAAGCTAGG TAATGTCTGG
GTTAATGACG CCTTTGGAAC GGCTCACCGC GCCCACGCAT CGACGGCCGT AATGGGACAG
TTTTTCGAAG ACCGCGTGGC TGGTTACGTG ATGAATGCCG AATTAGCTAA CGCCAAGAAG
ATTCTGGAAG AGGCAGAGCG GCCATTCACG GCCATTATGG GTGGTGCCAA AATCTCTGAT
AAAATTCTAA TTATCGAGAA ACTGCTTGAT ACGGTTGATA ACCTGATCAT CGGCGGTGGT
ATGACCTATA CCTTCACCAA AGCGCAGGGC GGCAACATTG GTAAATCGCT GCTCGAAGCT
GATAAGCAGG AGCTGGCTCT TGAACTGCTG AAAAAAGCCG AAGCTAAAGG CGTGAAGATT
TACATGCCCG TCGACAACCT CTGCGCCGAC GATTTTTCGA ATGATGCCAA CAGTCAGGTA
GTACCAACCG GTCAGATTCC TGATGGCTGG GAAGGGCTGG ACATCGGTCC AAAAACCATT
GAACTGTTCA AAGAGGTCGT TCTTCAATCG AAAACCATTC TCTGGAACGG CCCGATGGGC
GTATTTGAAT TCGAGAATTT CGCCAAAGGT ACGAACGCTA TTGCCGAAGC CGTGGTGAAA
GCTACTGAAG AAAATGGTGC TTTCTCGCTC ATCGGTGGTG GCGACTCGGC GTCGGCAGTC
AATCAGGCTG GTTACGGTGA TCGGGTCAGC TACGTATCCA CCGGTGGTGG TGCCCTGCTG
GAATACATGG AAGGTAAAGT GCTACCCGGT GTAGCTGCGC TGGAGTAA
 
Protein sequence
MKTVDTYNFA GKKALVRVDF NVPLDKEYNI TDDTRIKATI PTVLKIVNDG GSAILMSHLG 
RPKGGPEEKY SLKHILPALK EAFGRDVKFA DDCIGQSATD LAASLQPGEI LLLENLRFYK
EEEKGDVAFA EKLAKLGNVW VNDAFGTAHR AHASTAVMGQ FFEDRVAGYV MNAELANAKK
ILEEAERPFT AIMGGAKISD KILIIEKLLD TVDNLIIGGG MTYTFTKAQG GNIGKSLLEA
DKQELALELL KKAEAKGVKI YMPVDNLCAD DFSNDANSQV VPTGQIPDGW EGLDIGPKTI
ELFKEVVLQS KTILWNGPMG VFEFENFAKG TNAIAEAVVK ATEENGAFSL IGGGDSASAV
NQAGYGDRVS YVSTGGGALL EYMEGKVLPG VAALE