Gene Slin_3122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3122 
Symbol 
ID8726875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3790758 
End bp3792071 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content54% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003387932 
Protein GI284038002 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.720281 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAGC TGGTAAAAAC ATTCGTCTGC TTCGGCGCAC TTCTCACTTT CGGCCTGACT 
GGCTACGCTA CCGATAACGA CAAGTTCAGC GATACAACCC GGGCGTATGC GGTTCCTACG
CTGACCAAAA CACCCAAAGG GGCCATAGCC TTGTCCTGGA CGGAAAAAGA CCAGGATGGC
ATCGTCCACT TCTACTGGGC CGAGTCGGCC GACAAGGGCA AAACTTTCGG CGACAAAAAA
CTCATCTTTT CGTCGGCTGG TATTGGAAAC TCCCGGCTGA TGCGGCCTAA ACTGCTTTTC
AAAAAAGACG GTACACCTGT TGCTGTTTTC GCCTTGCGCG GCCCCGGAAC AGGCGCTCCT
CAGCCAACGG CACAGGCCCC AAAAGCGGAA CCCGCTCATG CTAACCACGA AGCGGCTCCG
GCCGGACATG ACCACGGTGC TGCTTATCAG GAAGCACCGG CCAAAAGTGC GCAACGGGGC
GGTGGCCGTC CCAGCGATTT ACAGATTGTT TACACGTATT CGAACGATCA GGGAAAGACA
TGGAGTCAGC CAGCGCCCGT TCATGCCGAT AAAACGCCTA ACATCGTCCG TGGATTTTTC
GACGCGACGG TGTTGCCAAA CGGCGAAATC GGCGTGGCTT ATCTGAACGA CATCGAAGGA
AAGCAACACC AGCGCGACAT GCGGTTCGTT AGCTCCAAAG GCAACCAGTT TAGCAGCGAA
CGCATTATTG ACCCGTTCGT CTGCGACTGC TGCAACATCA GTCTGCTGGT CGACAACTCG
GGTACGCTGA ATCTGTATTA CCGGGATAAT CAGGACAACA TCCGCGACAT CGCCAAGATG
AGTTCGAAGG ACAATGGAGC CTCGTTCACC AAATCAGAAA TCCTGTTCAA AGACAACTGG
CAGATCAACG GCTGCCCTCA CTCGGGCCCA ACCTCCAGCG CCAGCGCGGG AACGAATCTG
ATTGCGTGGT TTTCGGGTAC GCAGGAGTCG CCGGGCATCC GCGTGGTAAA TCAGCAGGGC
AAACGGTTAT TTGTTCTGGA CGATCCAACG GCTAAAAATG CCTATCTGGT AGCCGCCCCA
AAATCATCCG TATTACTGTG GGAACAAAGT CAGACATCGG AAGCAGGCAT AAGCTCCGTA
ATTGCCTTCA AAAACATTAA AGCAGACCAG ACGCCCACCA CGCAGCTGGT GAAGAACGCC
ATCAATGGAA CGAACGCCAG CGGCCTGGTT GTCGACAATC AACTCCTGGT TGCTTACGAA
GTGAAGCATG CCAATAACAA AAACTCTGTC GGTCTGGCCC AGATTGATCT TTAA
 
Protein sequence
MNKLVKTFVC FGALLTFGLT GYATDNDKFS DTTRAYAVPT LTKTPKGAIA LSWTEKDQDG 
IVHFYWAESA DKGKTFGDKK LIFSSAGIGN SRLMRPKLLF KKDGTPVAVF ALRGPGTGAP
QPTAQAPKAE PAHANHEAAP AGHDHGAAYQ EAPAKSAQRG GGRPSDLQIV YTYSNDQGKT
WSQPAPVHAD KTPNIVRGFF DATVLPNGEI GVAYLNDIEG KQHQRDMRFV SSKGNQFSSE
RIIDPFVCDC CNISLLVDNS GTLNLYYRDN QDNIRDIAKM SSKDNGASFT KSEILFKDNW
QINGCPHSGP TSSASAGTNL IAWFSGTQES PGIRVVNQQG KRLFVLDDPT AKNAYLVAAP
KSSVLLWEQS QTSEAGISSV IAFKNIKADQ TPTTQLVKNA INGTNASGLV VDNQLLVAYE
VKHANNKNSV GLAQIDL