| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3121 |
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| Symbol | |
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| ID | 8726874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 3788296 |
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| End bp | 3790725 |
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| Gene Length | 2430 bp |
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| Protein Length | 809 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_003387931 |
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| Protein GI | 284038001 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGTAC ATTACACATT CCTTTTCTAT ATAAGTACCC TGCTCACGTT GTTGGTATTG
CCCGCAGAAG CCCAAAGTCA GGGAATTATC AAAGGCGTTA TTACCACTCG GGACGGCAGC
CCAGCCTCCT TTGTTAACAT TGGGTTGAAA GAGACCCGTA AAGGAACAAT CACCACTGAA
GACGGCTCTT TTCTGCTAAA AGGCATTAGC CAGGGGGTAT ATACACTGCG TGTAACATTT
GTTGGCTTAC AGTCTCAGGA GAAAACAGTG CATGTTCGAT CAGGCCAAAC GGAAACGGTT
GACTTCATTC TGGCTGAAAA TGCGTCCCAG TTGAGCGAAG TTGAGGTTGT AGGTGCCAAC
AGGGCCGTTA CGCTCGGCAA AGCCAGTATC GCTCCCCTCG ACTTACCCCA AATGACGGGT
GTTGTCAGCA GCGTTGTTAT CGAAAATCAA CAGATTTCCC GTCTGGGGGA TGCACTGAAA
AACGTGAGCG GTGTTTCATT AACACAGCAG CGGGGCGGTG TAGCCGAAAC GTTTTCGGCC
CGCGGTTACA GCATTGGGAT TGCCGGTGCC GGTGGAAGCA TCTTTAAAAA TGGTGTCATT
ACCAACACCA TGGGCTTTCC CGAAGCCAGT ACGCTGGAAT CGGTAGAAGT GCTGAAAGGT
AGTTCGTCTC TATTGTATGG CAATGTGTCG GGCGGGCTGA TTGTGAACAT GGTGACCAAA
AAACCGAAGT TCGAATTTGG TGGAGAGGTG TCGATGCGCG CAGGCAGCTT TGGGCTGTTA
AAGCCGGTAG TCGATGTATA CGGCCCTTTG GCAAAAAACC TGGCGTTCCG GGTAATCGGC
ACTGTCGAAA ATGCCAAAAG CTACCGGGAT GTATTAAAAA CCGACCGCGT TTATATTAAC
CCTTCGCTGT TGTATAAACT CGGCCGGAAA ACAACCATTC TGCTACAGGG CGACTATCTG
AAATCGAACC TGACACCCGA CAATGGCATT GGTTCCCTGA ATGCCAACCA GGACGCCATC
ATACCGAATG TACCCCGGTC GCGGTTCATC AATACAAGCT GGGCCTACAA TAACGTTGAA
CAGACTAGTG GCTCGCTGAA CCTCGACCAT GCGTTTACCA ACAACTGGAA ACTGACATTC
ATTGCCGCAG CTCAGGGCAC CAGCGTATCG GCCTACGGTG CGGGGGTTCC CAACAACAAT
GTTGCCGCCA ACGGTGACTG GAACCGGGCG CTGAGCCGCA CTAAAACTGC CGAGAACAAC
TACACCGGTC AGGTAAACCT CAACGGTCGC TTCAATACGG GAATTATTGG TCACCAGTTG
CTGGTGGGTT CTGATCTGGT GGGTATTGTT AGCGAGAGTA ACGCGTTTTC CATCACCAGC
AATGGCGTTA CCGTAACCAC TTACGACAAA ATTAATATAC TGGACCCGAC GAAATTCGAA
ACTCGTTCCG ATATTCCGAC GGCCACTGCC ACCATTCGCA CGACTTCCCC ATCCACCCGC
CTTGGTGTTT ACGCCCAGGA CCTCATAAGC CTGACCGACA AACTTAAAGT GCTGGCTGGT
CTGCGCTGGT CACAACAGAA AACGGTTCAG ACTACCCTTC TCGACTTAAG AACCCAGCTC
GAAACGCGGG GCCCTGTCGA AACCAAAACG GATGCGGCCT TCTCGCCAAA GGTGGCGTTG
ATTTACCAGC CAACCCAGGG AACTTCGTTC TTCGGCAGTT ACGCCAGCAA CTTTACCATC
AATACCGGTG TCGACATCAA CGGGCAGTTA CTAAAACCAT CGATTGTTGA TCAATACGAA
GCAGGGGTTA AAAACGAATT TCTGGATGGA CGCATCACGG CCAACTTCGG TGTGTATCAT
ATCGTCAATA GCAATCTGGC CCTGATGGCC CCGTTCAGAC TGGACGGATC TCCCAATACC
GATTCGAACG TGAAAGAGTT TACGGGGCAA ACGACCAGCG ATGGACTGGA GATTGACCTG
ACCGGTAACC TATCCAAAAA CTTTTATTTC ATCAGCGGTT ATGGCTATAA CTACATGCGG
TATACGAAAA CGACGCAGGT GAAAGGGGCT TTTCTTGAGG GAGAACGCCT GACGAATAAT
CCGTCTCATA CAGCAAACTT CACCTTGTTT TATACCGTTG ACCGGTCGCC CTTACGTGGG
CTTAAACTGG GGGCTTCTGC TTTTTACACC GGTGCCCGCT ACGGCGGCAA CAACAATACC
TTTGGCCAAA CGCCGGAGTT CAGCCGCCTG ATTCCCCTTA CCGGTTTTGC CACATTCGAC
CTGTCGGCCG GGTACACGTA TCGGAAGGTA TCGCTACTGG CTAAAGTTTC GAACATCACC
AACGAACTGA ACTACCTGAT TCACGACCGG TATAGCATCA TGCCGATTCC ACCCCGGCAG
TTTATTAGCA CCCTCTCTTA TCGTTTCTAA
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| Protein sequence | MRVHYTFLFY ISTLLTLLVL PAEAQSQGII KGVITTRDGS PASFVNIGLK ETRKGTITTE
DGSFLLKGIS QGVYTLRVTF VGLQSQEKTV HVRSGQTETV DFILAENASQ LSEVEVVGAN
RAVTLGKASI APLDLPQMTG VVSSVVIENQ QISRLGDALK NVSGVSLTQQ RGGVAETFSA
RGYSIGIAGA GGSIFKNGVI TNTMGFPEAS TLESVEVLKG SSSLLYGNVS GGLIVNMVTK
KPKFEFGGEV SMRAGSFGLL KPVVDVYGPL AKNLAFRVIG TVENAKSYRD VLKTDRVYIN
PSLLYKLGRK TTILLQGDYL KSNLTPDNGI GSLNANQDAI IPNVPRSRFI NTSWAYNNVE
QTSGSLNLDH AFTNNWKLTF IAAAQGTSVS AYGAGVPNNN VAANGDWNRA LSRTKTAENN
YTGQVNLNGR FNTGIIGHQL LVGSDLVGIV SESNAFSITS NGVTVTTYDK INILDPTKFE
TRSDIPTATA TIRTTSPSTR LGVYAQDLIS LTDKLKVLAG LRWSQQKTVQ TTLLDLRTQL
ETRGPVETKT DAAFSPKVAL IYQPTQGTSF FGSYASNFTI NTGVDINGQL LKPSIVDQYE
AGVKNEFLDG RITANFGVYH IVNSNLALMA PFRLDGSPNT DSNVKEFTGQ TTSDGLEIDL
TGNLSKNFYF ISGYGYNYMR YTKTTQVKGA FLEGERLTNN PSHTANFTLF YTVDRSPLRG
LKLGASAFYT GARYGGNNNT FGQTPEFSRL IPLTGFATFD LSAGYTYRKV SLLAKVSNIT
NELNYLIHDR YSIMPIPPRQ FISTLSYRF
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