Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3116 |
Symbol | |
ID | 8726869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 3784254 |
End bp | 3784943 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | protein of unknown function DUF421 |
Protein accession | YP_003387926 |
Protein GI | 284037996 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAG AAGATATCTT TATAACTGAC TGGCTTCGGA TTCTCGTTGG TGAAGTTCCG GGAACGTTTT ACATCGAAAT TCTGATTCGG GCCGCTGCGG TTTACCTGAT TCTGGTTGTG TCCATGCGTC TGATGGGCCG ACGAATGGCT TCCCGGCTTA GTCGGAACGA AATGGCGGCT ATGGTTTCGC TGGCGGCCGC GGTGGGTATT CCGATCCTGG ATGCCCAGCG CGGCTTGTTA CCTGTTGTGG TTATTGCGCT GGTGGTGGTG TTTACCCAGC GGGTTATTTC CTACTGGGCG GCCAAAAACG AGAAATTTGA AGGCCTATCT CAGGGAATCA GCAGTACGCT CGTCGAAAAT TCCGTTATCC AGCTTGCCAG CATGAGCGAG TCACGTGTGA CCCGTGAGTT ACTTTTCGCC CAACTTCGGT CGGGAGGCAT CATTCATCTT GGGCAGGTTA AACGACTATA CATGGAAGCC AACGGTGCTT TTACCCTAAT TAAAGACCCT AAACCCAGAC CCGGCCTTTC CCTTATTCCA GCCTGGGATA ATGACTTTGT TGAGCAGCAG CCCAAAGCGC CCCATCAGTG CGTCTGCTTC CGATGCGGTT ACTTACAGCA ACCCCTGCAC CAAGCCGCCG ATGTTTGCCC CAACTGTAGC CATAACCAGT GGGTTCAGGC ACTTGCCTGA
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Protein sequence | MKKEDIFITD WLRILVGEVP GTFYIEILIR AAAVYLILVV SMRLMGRRMA SRLSRNEMAA MVSLAAAVGI PILDAQRGLL PVVVIALVVV FTQRVISYWA AKNEKFEGLS QGISSTLVEN SVIQLASMSE SRVTRELLFA QLRSGGIIHL GQVKRLYMEA NGAFTLIKDP KPRPGLSLIP AWDNDFVEQQ PKAPHQCVCF RCGYLQQPLH QAADVCPNCS HNQWVQALA
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