Gene Slin_3110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3110 
Symbol 
ID8726863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3774796 
End bp3775773 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content55% 
IMG OID 
Productglycosyl transferase family 2 
Protein accessionYP_003387920 
Protein GI284037990 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAAC CTGTGGTGAC CGTTATCATT CCTACCTATA AAAGACCAGC CCTGCTGCGA 
AACTGCCTGC TCGCTCTTGA CCAACAAGTG TTGCCAAAGG AAACATTTGA GGTTGTGGTA
GTGGACGATG GGAATGAAGC AGCCGTGGCC GAACTGGTAG CGGAGGTTGC GGAACAGACC
GGCTTAAAGG CCCGTTACCT GGGCCAGCAC GAACGTCAGG GACCGGCTGC CGCCCGTAAT
GCAGGCTGGC GGTCGGCCCG GACGCCGTTC ATTGCGTTTA CCGACGACGA TTGCCTGCCT
CAGCCGGGCT GGCTCAGTAC GGCGCTGGTA CAGTTTAATC GGGGGGCTCA GGTACTAACC
GGACGGGTTA AAATGCCGAT GCCCGATCAG CCTTCGCATC ACGACAAAAC AACGGCACTG
CTGGAAACCG CCGAGTTCGT TACGGCCAAT CTATTCTGTC GGCGGGCGGT CCTGGAACAA
GTGGGCGGTT TCGATGAGCG GTTCGATATT GCCTGGCGTG AAGACAGCGA CCTACACTTT
AAAATTATCA AGGCCCGCAT TCCTATTCTT TCCTGTCCCG ATGCCGTGAT TGTGCATCCC
CTTCGGTCAG CGCCCTGGTA CGCACCCCTC CGCGACGAGC GTAAGAACCG CTACGATGCC
CTCCTTTTCA AAGAGCACCC GGCCTTGTTT CGTGAACGCA TTCCGGCTTA CAAGTGGCTC
GTGATCCGGT ACTATGCCAG TGTCGTATCG CTACTGATTG GATTCATTGG TTTACTAACC
GCTAACAATC AAGTAGTTGC CATAGGTTTT ACCCTTTGGC TATTGCTCAC ACTGGTACTG
ATGAGCGAAC GATTAGCCAA CCAGCCAATT AACGGTACGA CGGTGAAAGC GGCCCTGCTG
ACCAGCCTGG CCACTCCTTT CCTGTCGGTC TACTGGCGAT TGTACGGTGC CTTTTCCTAT
CGTGTCTGGT ACTGGTAG
 
Protein sequence
MEQPVVTVII PTYKRPALLR NCLLALDQQV LPKETFEVVV VDDGNEAAVA ELVAEVAEQT 
GLKARYLGQH ERQGPAAARN AGWRSARTPF IAFTDDDCLP QPGWLSTALV QFNRGAQVLT
GRVKMPMPDQ PSHHDKTTAL LETAEFVTAN LFCRRAVLEQ VGGFDERFDI AWREDSDLHF
KIIKARIPIL SCPDAVIVHP LRSAPWYAPL RDERKNRYDA LLFKEHPALF RERIPAYKWL
VIRYYASVVS LLIGFIGLLT ANNQVVAIGF TLWLLLTLVL MSERLANQPI NGTTVKAALL
TSLATPFLSV YWRLYGAFSY RVWYW