Gene Slin_3106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3106 
Symbol 
ID8726859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3769963 
End bp3771270 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content56% 
IMG OID 
Productglycosyl transferase group 1 
Protein accessionYP_003387916 
Protein GI284037986 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAAA GGCTGGCGCT TATCTCCGAA CATGCGTCTC CAATGGCAAC CATTGGTGGT 
ATCGACGCAG GTGGTCAGAA TATTGCCGTT GCCGAGTTGG CAAAGGAGTT GGCAAAACTA
GGCTTTAGCG TAGATGTGTT TACCCGGTGC AGCTCTCCTG AGGAGGCCGA AGTCGTACAG
TGGCAACCCC GCATACGCGT CATTCATGTG ACAGCCGGCG CGCGGCAGTA CCTGCCCAAA
GAAGCCCTGC TGCCCCACAT GGACGAGTTT GCGCAGAACA TGAGTCGATT TATCCGTAAA
CACGCCCTCA ACTACTCCGT TACTCACGCA CACTTCTTTA TGTCGGGGCT GGTAGCCCTC
AGAATCAAAC AATTGCACCG AATCCCGTTC ATTGTAACGT TTCACGCGCT GGGGCTTGTT
CGGCGTCAAT GCCAGGGCAA TTCGGATGGA TTTCCAACCG AGCGCATTCT GATCGAAAAG
CGGATCATGC AGGAAGCCGA TGGCATTGTT GCCCTCTGCC CGCAGGATAG CGACGATATG
ATAAAATTAT ACGGTGCAGA TGCATCCAAA ATTACGATCA TTCCGAACGG CTATAACCCA
CAGGATTTCT TTCCCATCCG GCAGGAACTG GCCCGTCAGA CGCTGGGCCT CGATAGTCAG
GAACCTATGC TGTTGCAACT GGGCCGGATG GTTCCGCGCA AAGGAGTCGA CAATGTGGTG
CGGGCGCTGG CGATTCTCCG GCAGCGACAC GGTATTGTGG CAAGGCTCCT GATTGTGGGG
GGCGATTCGC GCCAGCCGGA CCCTGAACTC ACGCCCGAAA TCGGCCGACT TCAGGCACTG
GCGTCGTCGC TTGAGGTAAC GGACCTGGTT ACGTTTACCG GAAGCCGCAC GCGCGACGAA
CTCCGGCATT ATTACAGTGC CGCCGATGTA TTTGTAACTA CGCCCTGGTA CGAGCCGTTT
GGCATTACCC CACTGGAAGC CATGGCTTGC GGAACGCCCG TGATCGGGGC GGCCGTGGGG
GGTATTAAAC ATACGGTGCT ACTGAACAAA ACAGGTTTTC TGGTGCAACC GAACGACCCC
TCGGCACTGG CCGAGAAACT GGCGGTGCTG ATTACCAACA AACCCCTTCG CCAGCGATAC
AGCCAGCAGG CCATTCAGCA CGTAAAGACC GGCTACACCT GGGCGAGAGT GGCCCAGCAA
ACCGCCGATT TATATGACTT GATTACCAAC GGCCGGGTTC AGACGGGCTT CTGGCTACGG
GGCACCGGCC ACCAGACCTC TTCAATGCCA ATTCCCGACA GATCGTGA
 
Protein sequence
MDKRLALISE HASPMATIGG IDAGGQNIAV AELAKELAKL GFSVDVFTRC SSPEEAEVVQ 
WQPRIRVIHV TAGARQYLPK EALLPHMDEF AQNMSRFIRK HALNYSVTHA HFFMSGLVAL
RIKQLHRIPF IVTFHALGLV RRQCQGNSDG FPTERILIEK RIMQEADGIV ALCPQDSDDM
IKLYGADASK ITIIPNGYNP QDFFPIRQEL ARQTLGLDSQ EPMLLQLGRM VPRKGVDNVV
RALAILRQRH GIVARLLIVG GDSRQPDPEL TPEIGRLQAL ASSLEVTDLV TFTGSRTRDE
LRHYYSAADV FVTTPWYEPF GITPLEAMAC GTPVIGAAVG GIKHTVLLNK TGFLVQPNDP
SALAEKLAVL ITNKPLRQRY SQQAIQHVKT GYTWARVAQQ TADLYDLITN GRVQTGFWLR
GTGHQTSSMP IPDRS