Gene Slin_3093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3093 
Symbol 
ID8726846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3752409 
End bp3753212 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content40% 
IMG OID 
ProductHNH endonuclease 
Protein accessionYP_003387903 
Protein GI284037973 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.208974 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.66664 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATAT GCTGTAATGT AATGAAACAG GAGATGAAGG GCTCCGACAA AGTTCTATAC 
ACTCCTCCAG GTGACACAGG TCCCACATTT TGCATATATT ATCAACTTCC CCGTGAAAAA
GATGAGCATT TTCTGGCTCA AGCAACTGAA TTCTTGATAA GGGTTTTCCA AACGGGCTTA
CTGAGCCTTT GCGAGGAAAT TCATAAGGAA ACGAATTACA ATTTTGAAAG ATTTACAAGA
AAAATTAAAA ACCGTGGAGG CCTCAAAACG GTAAAATCCA TGCTTCAGCC AGATTCCACT
ACGACTGGTA TGTTTAAATC ACTAGCTTCA AAAGGTCGCT TAGATTTATC TGTAGAATAC
TTTGTGCTAC AAATGCCCTG GTACAACTTA TTTACAAAAA GCGAGTTGGC AGTTGCCAAG
AAAAGGCTTT TTGACGCCAC CGGTTTGTCA GAATTTGGGC CGTCAATTAG TTATCTAGCT
GATGACGCTA TTTGTAGTAT AGAACTTAAT TCTTATGAAA AGGATCTAGA AGCCAAGCAA
CTTTGTCTTG AGCACTTTGG ACCAGTTTGC ATTATTTGCA ATATTGATTT TGAGTATGCT
TATGGCTCAA TTGGAAAAAA TTTCATTCAA GTACATCACA TTGTTCCTGC GTCCTCTATA
CCGAAACGAT ACATTGTAGA TCCTATACGG GATTTACGGC CCGTCTGCCC CAATTGCCAC
GCAATGTTGC ATACACAGGA GCCCCCATAC ACCATAGATC AAATAAAAGA TGTTTGTAGA
GCTCGCTACC CTAGCCGGTC ATAA
 
Protein sequence
MTICCNVMKQ EMKGSDKVLY TPPGDTGPTF CIYYQLPREK DEHFLAQATE FLIRVFQTGL 
LSLCEEIHKE TNYNFERFTR KIKNRGGLKT VKSMLQPDST TTGMFKSLAS KGRLDLSVEY
FVLQMPWYNL FTKSELAVAK KRLFDATGLS EFGPSISYLA DDAICSIELN SYEKDLEAKQ
LCLEHFGPVC IICNIDFEYA YGSIGKNFIQ VHHIVPASSI PKRYIVDPIR DLRPVCPNCH
AMLHTQEPPY TIDQIKDVCR ARYPSRS