Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3086 |
Symbol | |
ID | 8726839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 3742064 |
End bp | 3744505 |
Gene Length | 2442 bp |
Protein Length | 813 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | Type I site-specific deoxyribonuclease |
Protein accession | YP_003387896 |
Protein GI | 284037966 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.461628 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.442211 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAGA AAACCCTTTC TGAGCGAGAT ATATGCACCA AGTTCATTAC ACCGGCTTTA GAACTGGCTG GCTGGAAAGA CAAATTTTTA GAAGAGGTTT CGTTTACTGA TGGCCGTATA CGCGTGGTAG GCAAGATGAC TACGCGGGGT GTATCGAAGC GGGCGGATTA CATTCTGTAT TATAAGCCGA ACATTCCGGT GGCTATTGTT GAAGCGAAAG ACAACAAACA TACCGTATCG GCGGGATTGC AGCAGGCCTT AGAGTATGCG CGCATTCTGG ATATTCCCTC CGTATTCAGT AGCAACGGTG ACGGTTTCAT TTTTCATGAC CGTACTGCCA CAGACGATAC CATAGAGCAA GAACTTACGC TGAATGAGTT TCCCACCCCT GCCCAACTCT GGGAGCGTTA CAAGGCTTAT AAAGGCCTTG AATCTACCGA AGAGGATGCA ATTGCTCAAC AGGAATACTA TACTGATGGA TCGGGACGCC AGCCACGCTA TTATCAACAA ATAGCCATCA ATAGAACTGT GGAGGCCATT GCGAAAGGCC AAAACCGGGT ACTGTTGGTA ATGGCAACCG GAACCGGAAA AACGTACACC GCTTTTCAGA TGATTTATCG CCTTTGGAAA AGCGGCCGTA AAAAGCGGAT TTTGTTTCTA GCCGACCGGA ACGCCTTGAT CGACCAGACG CGCCGAGGAG ATTTCAAGTA CTTTCGCGAT AAGATGACGA TCATCCGTAA GAGGGTGGTG AACGTCGGCG GGAAAGAAGA ATTAGTATCG ACTCGTAGGC GGGGCATTAG TGCGACAGAT AAAGCATATG AGATATTCCT AGGCTTGTAT CAAGGACTCA CTGGCAACGA AGGTATAGAC GCTTATAAAG ACTTCTCCCC TGACTTTTTT GACCTAATTG TTGTCGATGA GTGCCATCGG GGTAGTGCTT CCGATGATTC ATCCTGGCGG GTTATTCTCG ATTATTTCAA AGGAGCCACA CAGGTAGGTC TGACGGCAAC ACCACGCGAA ACAAACACTG TTTCTAACAG TGAATACTTC GGCGACCCTC TTTATACTTA CTCGCTCAAA CAAGGCATTG ACGATGGGTT TCTGGCCCCG TACCGGGTTG TACGGATTGG GTTGAACGTT GACCTGGAAG GCTGGCGACC GCCAAAAGGA AAACGAGACA AAAAGGGAAA CCCAGTAGAG GATCGAATTT ATAACCGCTC CGATTTTGAC CGCAACATCG TTGTGGAGGA CCGCCGTAGG CTGGTTGCCG AAAAGATTAC GGAATACCTG AAAGGCCAGA ATCGTTTCAT GAAAACCATT GTGTTCTGCG TAGACATCGA ACACGCAGAC GGTATGCGAA ACGCTTTGGT CAAACAGAAC GCCGATCTGG TCAAACAGAA TTATAAGTAT GTGATGAAGA TCACAGGCGA CGATGAAGAA GGTAAACGAG AGCTGGATAA TTTCATCAAT CCCGAAGAAC GCTACCCGGT TATTGCCACG ACATCAAAGC TGATGACAAC TGGCGTAGAT GCACAGACTT GTCAGCTAAT CGTACTGGAT AGTAATATTC AATCAATGAC GGAGTTTAAG CAGATCATTG GCCGTGGAAC CCGTATCAAT GAAGAGTTCG GCAAGCTATA TTTTACGATT CTGGATTTTC GTAATGTAAC AGACTTATTT GCTGATCCTG ACTTCGACGG TGATCCTGTT CGAGTGAAAA TAGTTAGCGA AGACGAAACT CTAGAAACAG TAGAAGCTGA GGAAGAAGCT GATGAAAGTT TAGTATCGAA TGATGAGGCG GAGGTCGAAA TAGAAGAACC TCTACGGCCA AAAGTCCGCT ATAGCCTAGA TGATGAGCCC GAGATCGTCA ACGACGAACG GAAGGTTTAT GTCAATGGCG TTGACGTATC GGTGCTGAAC AGCCTTGAAC TCACCTTCGA CAATGATGGC AAACCTATTT TAGTGGGCCT GAAAGATTTT ACCCGCGACA AAATGCGGGA GAAGTTCAGG AGCATGGACG ATTTCCTAAC CTACTGGAAT GCTGCCCAGC GCAAAGAAGT CATTGTTCAG GAGCTCATGG AACAGGGCGT GCTACTAGAT GCCTTCACCA ACGCCGTTGA CCGCGATGCT GACTTATTCG ATCTGATTTG CCACGTTGCC TTCGACCAGA AGCCGTTGAC ACGAAAAGAG CGAGCCAATG AAGTAAAGAA GCGAAATTAC TTCGGTAAAT ACGGAGAGAA ATCCCGCGCT GTTCTGGAGG CTTTATTAGA CAAATACGCT GATGAGGGCG TGGTTAATAT TGAAACGTTG GATGTTCTTC GCGTTCAGCC CCTCAATAAA TACGGATCGA CGGTAGAGAT TGTTAAGTTG TTCGGTGGCA AGCCGCAATA CTTAGAGGCC GTACGCGAAT TAGAAAGCGA AATTTATAAA GCAGTAGCTT AA
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Protein sequence | MNKKTLSERD ICTKFITPAL ELAGWKDKFL EEVSFTDGRI RVVGKMTTRG VSKRADYILY YKPNIPVAIV EAKDNKHTVS AGLQQALEYA RILDIPSVFS SNGDGFIFHD RTATDDTIEQ ELTLNEFPTP AQLWERYKAY KGLESTEEDA IAQQEYYTDG SGRQPRYYQQ IAINRTVEAI AKGQNRVLLV MATGTGKTYT AFQMIYRLWK SGRKKRILFL ADRNALIDQT RRGDFKYFRD KMTIIRKRVV NVGGKEELVS TRRRGISATD KAYEIFLGLY QGLTGNEGID AYKDFSPDFF DLIVVDECHR GSASDDSSWR VILDYFKGAT QVGLTATPRE TNTVSNSEYF GDPLYTYSLK QGIDDGFLAP YRVVRIGLNV DLEGWRPPKG KRDKKGNPVE DRIYNRSDFD RNIVVEDRRR LVAEKITEYL KGQNRFMKTI VFCVDIEHAD GMRNALVKQN ADLVKQNYKY VMKITGDDEE GKRELDNFIN PEERYPVIAT TSKLMTTGVD AQTCQLIVLD SNIQSMTEFK QIIGRGTRIN EEFGKLYFTI LDFRNVTDLF ADPDFDGDPV RVKIVSEDET LETVEAEEEA DESLVSNDEA EVEIEEPLRP KVRYSLDDEP EIVNDERKVY VNGVDVSVLN SLELTFDNDG KPILVGLKDF TRDKMREKFR SMDDFLTYWN AAQRKEVIVQ ELMEQGVLLD AFTNAVDRDA DLFDLICHVA FDQKPLTRKE RANEVKKRNY FGKYGEKSRA VLEALLDKYA DEGVVNIETL DVLRVQPLNK YGSTVEIVKL FGGKPQYLEA VRELESEIYK AVA
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