Gene Slin_3078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3078 
Symbol 
ID8726830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3728751 
End bp3729614 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content54% 
IMG OID 
ProductMOSC domain containing protein 
Protein accessionYP_003387888 
Protein GI284037958 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.558728 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAATTT CAGAACTCTA TATTTACCCC ATAAAATCGT TGGGTGGTAT TTCGCTGACC 
GAAGCCATTG TCGAAGAAAA AGGCTTTCGT TACGACCGGC GGTTTATGCT GGTTGAACCG
GATGGTACCT TTATGACCCA GCGTGCCAAT CACCAAATGG CGTTACTCGA TGTGGCCATT
CAGGGCGATA CCCTGCGCGT CTGGCACCGG CATCGTCCGG ACGATGTGCT TCAGTTACCC
CTGGTTATGC CCGAGGTGGA GCCGGGCGTA AGTCGTGACT GGCTGAACGT TACGATCTGG
GACGACAACG ATGTGCCCGC GCTGACCGTA AGCGACGAAG CTGACCAATG GTTTTCCGGC
GTTCTCGGCA AACCCTGCCG ACTGGTATTC ATGCCCGAAA CAACTCATCG CCCGGTCGAT
CCCGCTTATG CCCGCCAACA GGATGCGGTT AGTTTTGCCG ACGGGTATCC CTATTTGCTT
ATTGGTCAGG CTTCGCTCGA TACGCTGAAT CAACGACTTG CCGACCCGGT GACGATGCAG
CGATTTCGGC CCAACATTGT GGTTAGCGGC AGTTTGCCTT ATGAAGAAGA TGCCTGGAGT
CACTTTTGCA TTGGGGAAAT CAGTTTTTAC GGTGTGAAGC CCTGCGCCCG CTGCGTACTG
ACGACCATTG ATCCCGAAAC GGGCCATACC GGCAGAGAGC CCTTGCGGAC CTTGTCGACG
TATCGACAAT GGAAACACAA AATCCTGTTT GGCCAAAACC TGCTTGTGAA GCTAACAGGC
GAACCGGTTT CGGTACGGGT TGGGCAGCAA ATTGAGGTAC TTGCACGGCA CGAACCCTGG
CTGGCACCGC CCGTTCAGCT TTGA
 
Protein sequence
MTISELYIYP IKSLGGISLT EAIVEEKGFR YDRRFMLVEP DGTFMTQRAN HQMALLDVAI 
QGDTLRVWHR HRPDDVLQLP LVMPEVEPGV SRDWLNVTIW DDNDVPALTV SDEADQWFSG
VLGKPCRLVF MPETTHRPVD PAYARQQDAV SFADGYPYLL IGQASLDTLN QRLADPVTMQ
RFRPNIVVSG SLPYEEDAWS HFCIGEISFY GVKPCARCVL TTIDPETGHT GREPLRTLST
YRQWKHKILF GQNLLVKLTG EPVSVRVGQQ IEVLARHEPW LAPPVQL