Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3066 |
Symbol | |
ID | 8726818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 3716022 |
End bp | 3717194 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | |
Product | integrase family protein |
Protein accession | YP_003387876 |
Protein GI | 284037946 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0221886 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.652565 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCACAA TTCGTATTGA CGAAAAAGAA CCGACGCTGT TGGTGGTGTC ATTTTCCGAA GATCCGGTCG GGAATAACTT AATACGAGAA ATAGCTGGTC GGCGCTGGAG CTATTCGCGT CGGTGCTGGC TTCTGCCCAA TACGCGCGAT AGTGTAGTAA AAGTCGGCAA GCTTTTTGGC AAAGCGTACT GCCGGTTCGA TGAAGCGGTA GTGCGGCTCT ATAAACCCGA TGCCAGCAGT AAAGTGATCG AATCGGCGAC AAATCCGCTC TGGCCACCAC AACAGGCAAA CGCCCAATCA AAACCGTTTC GGTATATGCC GCCTGTGTTG GAGTACGACC AGCACCCGAT TATCATTGCT GGTTGTAATG CCCTCCAGAT CGGAAATTAT AGCTATAGGA CGCTTAAGAA TTATAAACAG GCACTCATCG CCCTAATTCG ATATGCTGGT TCAATACCGC TTGATGAACT CACCAGGGCA CAGTATCAGG CCTACTTATT GTTCCTGACC GAAAAAAAAC GACTGAGTAG TGCAACAATC AATGTCCATA TCAATGCGTA CAAGTTTTAT CAGGAAAAAG TACTGCAACG CGACAAATTA TATTTTGATA TTGATTATCC TCGTCAGCCA ACAAAGCTCC CGACCGTTTA TAGTGTAGAT GAAGTGAGGG CGATAATTAA AGCGACTACA AGTCTGAAAT ATCGTACACT GTTCAGGTTG ATTTACAGCA CTGGCCTACG GCTTAGCGAA GCGGCTCATT TGCATCTGGT CGATCTGGAC CGCGATCGTA GACTTATTAC GGTTCGGGCT GGAAAGGGCA AAAAAGACCG GGTGGTTATG CTGTCTGAAA AACTTGACCT GGATATTAAT ACCTACCTGA ATCAGTATAG ACCTCACCGT TATTTATTCG AAGACGCCAG TACGAGAGAG CCAATTTCTA TCCGGACGAT TCAACAGGTT TATAGCAATA CTGTTCGGTT TGCCGGAATT GTGAAGCGAG GAGGTATTCA TAGCCTTCGG CATTCGTTCG CCACACATCT GCTGGAATCT GGTGTAGATA TCCGCCATAT TCAAGAACTC CTGGGGCATG AAAGTATCCT GACAACCATG CGCTATACAC ACGTAACGGC CGACAAAATC AGTAAGCTCA GAAGTCCGCT GGATGATTTA TAG
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Protein sequence | MITIRIDEKE PTLLVVSFSE DPVGNNLIRE IAGRRWSYSR RCWLLPNTRD SVVKVGKLFG KAYCRFDEAV VRLYKPDASS KVIESATNPL WPPQQANAQS KPFRYMPPVL EYDQHPIIIA GCNALQIGNY SYRTLKNYKQ ALIALIRYAG SIPLDELTRA QYQAYLLFLT EKKRLSSATI NVHINAYKFY QEKVLQRDKL YFDIDYPRQP TKLPTVYSVD EVRAIIKATT SLKYRTLFRL IYSTGLRLSE AAHLHLVDLD RDRRLITVRA GKGKKDRVVM LSEKLDLDIN TYLNQYRPHR YLFEDASTRE PISIRTIQQV YSNTVRFAGI VKRGGIHSLR HSFATHLLES GVDIRHIQEL LGHESILTTM RYTHVTADKI SKLRSPLDDL
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