Gene Slin_3045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3045 
Symbol 
ID8726797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3699045 
End bp3699866 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content51% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003387855 
Protein GI284037925 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.184517 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACTG ATGAATTGCC AGTGACAACA ACACAGATTG CTACCATAAA AGAGTTTTTA 
GATGCGAAGG CCGATCTATA CAATCGGCCT TCCTTTATTG AGCGCGACCC CATTAGCATT
CCGCACCGTT TCAGTAAAAA GCAGGATATT GAGCTGATGG GTTTCTGGGC CGCCGTGCTG
GCCTGGGGAC AGCGCCCGGT CATTTTAAAA AAGGCGAACG AGCTGGTCGA ATTGATGGAC
GGCGCCCCCC ACGATTTTGT GCGTAACCAT GAAGAAGCCG ATCTGAAACG CTTCCTGAAC
TTCAAACATC GCACTTTCAA CGCAACGGAC GCGCTCTATT TTTTGCACTT CTTCCGGCAG
TATTACCTGG ACAACGACTC ACTGGAAGAC GCTTTTTTAC CCACAGAAAC CGATTCACTC
AACAGCCAGT CTATACAAAC CGTCGAGTCA TCCCTGATTA CTTTCCATGA TCGGTTTTGT
GGTCTAACCG ATTTCTTTCC CGAACGAACC CGCAAGCATA TTGCCACACC AGCCCGGAAC
TCATCGTGCA AACGACTACT AATGTTTCTG CGCTGGATGG TCCGCCAAGA CGATCGCGGT
GTTGATTTTG GCATCTGGAC ACGGCTTCGC CCCCATCAGC TGGTGATCCC TATCGACGTG
CATGTCAACC GCGTAGCGCG GCATCTCCAA TTACTATCCC GCCCCCAAAC CGACTGGAAA
GCCGCCCTTG AACTTACCGA AACACTGCGT CAGTTTGACC CGGCAGACCC GGTGCGCTAT
GATTTTGCTC TTTTTGGGCT GGGTGTCGAA GGAGAAATGT AA
 
Protein sequence
MMTDELPVTT TQIATIKEFL DAKADLYNRP SFIERDPISI PHRFSKKQDI ELMGFWAAVL 
AWGQRPVILK KANELVELMD GAPHDFVRNH EEADLKRFLN FKHRTFNATD ALYFLHFFRQ
YYLDNDSLED AFLPTETDSL NSQSIQTVES SLITFHDRFC GLTDFFPERT RKHIATPARN
SSCKRLLMFL RWMVRQDDRG VDFGIWTRLR PHQLVIPIDV HVNRVARHLQ LLSRPQTDWK
AALELTETLR QFDPADPVRY DFALFGLGVE GEM