Gene Slin_3034 details

Gene Information

• Locus tag: Slin_3034
• ID: 8726786
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Spirosoma linguale DSM 74
• Kingdom: Bacteria
• Replicon accession: NC_013730
• Strand: -
• Start bp: 3675477
• End bp: 3678866
• Gene Length: 3390 bp
• Protein Length: 1129 aa
• Translation table: 11
• GC content: 49%
• Product: ASPIC/UnbV domain protein
• Protein accession: YP_003387844
• Protein GI: 284037914

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 30
• Fosmid unclonability p-value: 0.721984
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAATAGCC AATTCCCTCA AAGTACCAAT AGAGACCTGA TTGATCGTTT ACGGTATTCT 
GTTTGCTTCC CGTTTCTGAT TATATGCCTG TGTTGCCCGG TAGTGTATGC GCAGAATCCG 
CTCTTCCAAC TCCTTGCTCC CAAGCAGACC CATATTGATT TTAAGAACGA TATTGATGAG 
AACGAAAGCC TGAACGTGCT TTCCTACGAA TATTTCTACA ACGGTGGGGG CGTGGCCGTT 
GGCGATATTA ACAATGACGG TTTACTGGAT TTGTTCTTCA CTGCTAATCT GAAAGCCAAT 
AAATTATACC TTAATCTGGG TAAATTAACC TTTAAAGACA TTACCAGTGA GGCCGGTGCT 
CAGTTAGGCG GTAGAGCGGG CGGCTGGAAA ACGGGCGTTA GTATGGCCGA TGTCAATGGC 
GACGGCTGGC TGGATATTTA CGTTTGCTAC TCAGGCAAAG GAGACGAAAG CAAGCGCAGA 
AATCAGCTGT TTATCAACCA GGGGGCTGGC CCTAAAGGCA TGGTTCGGTT TGTGGAACAG 
GCAAAGGAAT ACGGTGTCGA CGATAACGGC TATAATACGC AGGCTACGTT CTTCGACTAT 
GATCGGGATG GCGACCTCGA CCTGTTTCTA CTGCATCACA ATGTCAAGAA ATACGATAAC 
ATGGAACTGG CCAAACTACA CGGTGAGACC GACCTGCTAG CTGGCAATAA ACTGCTCGAA 
AATAGAAACG GTCACTTTGT CGATGTGTCC CAGAAAGAAG GGATCCATCA ATATCCGTTA 
ACGTTTGGTC TGGGAATGGC CGTAGCAGAT GTTAATAAAG ATGGGTGGCC GGACATCTAC 
GTGACGAACG ATTATAACGA GCCAGATTAC CTCTACATAA ATCAGAAAGG GATTGACCTA 
GCCGCACGGC GGTCGGGTGA GCCGGCTTTT AAAGACGAAA CCCAGTCCTA CTTCCGGCAT 
CTGGCGCAGT TCTCGATGGG CGTAGATATT GCCGATTATA ACAATGACGG TCTGCCCGAC 
ATCATGTCGC TGGATATGCT ACCGGAAGAT AACCGGCGCC AGAAACTGTT GCAGCTTCAG 
GAAAACTACG AGTCGTTTGA GTTGATGCAG CAGCAGAAAC TACAGCGGCA GTATATGCGG 
AACATGCTGC AACTCAACAA CGGCGATGGT ACATTCAGTG AAATAGCGCA AACGGCGGGC 
GTGTCGAATA CCGATTGGAG TTGGTCGCCT TTGCTGGCCG ATTTTGACAA CGACGGTTAT 
AAGGACCTGT TTATTACCAA CGGTTACCTG CGTGATTATA CGAACAAAGA CTTCCTTAAA 
TACTGGGGCG ACTATAAAAT CAAAAAAGCA ATTGACCGGG AGCCCGTGCA ACTGATGGAT 
CTGGTAAAAG CCATGCCGTC AACCAAAATT GCTAATTACA TCTTCAGCAA CAATCACGAT 
TTAACCTTCA CAAATAAACA GCGGGAATGG GGTTTTCAGA CCCCCTCAAT CTCGAACGGG 
GCCGTCTACG CCGACCTTGA CAACGACGGT GATCTGGAAC TGGTAGTCAA CAACATTAAC 
GAGCCGGCTT TCGTGTATCA GAACATGAGC CGGGAACAAT CTGCCAATGG GTTTCTTCAG 
GTAAAACTGG TGCCTTCCGG GAAAAACAGG ACCGCTATCG GCGCTAAGGT CACGCTGTTT 
GCTAATGGCA ATTTACAATA TCAGGAGGTA AATCCGGTGC GGGGTTATTT ATCAAGCCAA 
CCGCTCACGC TTCATTTCGG CGTTGGAACG GCCAGTAGGG CTGACTCCAT CAACATTATC 
TGGCCGGATC AATCTGTACA AAAATTAACC GGTGTTCCTG TCAACCAGCA ACTAGTTGTG 
CAACAGCAGG CGACTCCCGC TAGCGTTAGT CAGGCTGCTG TGCAGAAAAT GGCCTCACCC 
GTGTTCACGA AAGTAGACCC GGTGCTGGCC CATACGCACG AGGGGTTTCT GGAAAATGAT 
TTCAAACGTC AGCCGTTGAT GCTCTGGATG TATTCGCACA CGGGGCCGAT ACTGGCGAAG 
GGCGACATAA ACAAAGACGG TCTGGACGAT GTGTTCATCA GTGGCGACCA GAACAAGCCG 
GGCAGCATCT GGAAGCAGCA GACAAACGGG ACGTTCAAGC AGGTAGAAGG ACTAGTTATT 
GGCGACGAAT CCATATCATC CGTTTCGGCC GCTGTCTTTT TCGACGCCAA CGGCGACGGG 
TATGACGATC TCTACGTAGC GAAAGGAGGC TACTCGTTAT TTGAAATCAA TACAACCTCC 
TTTCAGGATG AGTTGTACAT GAATGACGGA AAAGGCAACC TGACATTGGC AAAAACAGCA 
CTGCCCAACC TCGCTGCCAG CAGCAAAGCC TGTGTTCGGC CGTACGACTA CGATCAGGAT 
GGCGATATCG ACTTGTTCGT GGGTGGCCGG GTTGTTCCGG GGCGCTACCC CGAAGCACCG 
GTTTCCTATC TGCTCCAAAA CACCGGCACA GGCCAGTTTA GGGCGGTCCC CATTCCATTC 
GCTAAAATAG GAATGGTGAC GGACGTAAAA TGGGCCGATA TGAATGGTGA TGGGCGGGCA 
GACCTGGTCC TGTGTGGTGA GTTCATGCCC ATCAAAATCT ACCTGAATAC AAAAGATGGG 
TTTGTCGATA AAACGAAGCA GTATTTCCCG GAGGAGGAGA AAGGCTTCTG GCTGTCGCTA 
ACGATAGCTG ATGTAAATGG AGATGGACAG AATGATATTC TGGCCGGAAA TCTGGGTACT 
AATTCACAGA TTAAGTATTC ATCTAAAGAG CCTGTCGAGC TTGTCTACGC CGATTTTGAT 
AACAATGGCT CTATCGATCC CTTCGTTAGT TTCTACGTTC AGGGAACATC GTATCCGTTT 
GTAAGCCGCG ATGAACTGAA TGATCAGATC TACGCGATGC GCAAGAAATT TGCGTTTTAC 
AAAGACTACG CAAATGCGAC TATTAGCACT ATCCTACCTG CCGATGACCT GGCCAACGCG 
CCGAAACTGA CGGCTACGGA GTGCCATTCT GTCTGTTTTC TGTCGAAAAA AGGACAATTT 
GAAAAACAGA TTCTGCCAAT AGAAGCCCAG TTCGCTCCGG TCACAAACAT GCTATGTGAG 
GATTTTGACC GGGATGGTCA ACTGGACGTA CTGCTGTTGG GAAACAAATC GGACAATCGG 
TTAAAACTGG GTAGCATGGA CGCGAACTAC GGCTGTTTAC TGAAAGGAGA TGGTAAGGGA 
GGTTTTACGT ATGTGAGCCA GCCTGCTTCG GGTTTATCCG TGATTGGTGA TGTAAAATCG 
GTTGTTGATA TCGGAATCAA TCAGAACAGG TGTTTACTGA TCGGAGCCTT CAATCAGCCG 
TTGCAGGTGT ACAAAAAGCA AAAACTATGA 

 

Protein sequence

MNSQFPQSTN RDLIDRLRYS VCFPFLIICL CCPVVYAQNP LFQLLAPKQT HIDFKNDIDE 
NESLNVLSYE YFYNGGGVAV GDINNDGLLD LFFTANLKAN KLYLNLGKLT FKDITSEAGA 
QLGGRAGGWK TGVSMADVNG DGWLDIYVCY SGKGDESKRR NQLFINQGAG PKGMVRFVEQ 
AKEYGVDDNG YNTQATFFDY DRDGDLDLFL LHHNVKKYDN MELAKLHGET DLLAGNKLLE 
NRNGHFVDVS QKEGIHQYPL TFGLGMAVAD VNKDGWPDIY VTNDYNEPDY LYINQKGIDL 
AARRSGEPAF KDETQSYFRH LAQFSMGVDI ADYNNDGLPD IMSLDMLPED NRRQKLLQLQ 
ENYESFELMQ QQKLQRQYMR NMLQLNNGDG TFSEIAQTAG VSNTDWSWSP LLADFDNDGY 
KDLFITNGYL RDYTNKDFLK YWGDYKIKKA IDREPVQLMD LVKAMPSTKI ANYIFSNNHD 
LTFTNKQREW GFQTPSISNG AVYADLDNDG DLELVVNNIN EPAFVYQNMS REQSANGFLQ 
VKLVPSGKNR TAIGAKVTLF ANGNLQYQEV NPVRGYLSSQ PLTLHFGVGT ASRADSINII 
WPDQSVQKLT GVPVNQQLVV QQQATPASVS QAAVQKMASP VFTKVDPVLA HTHEGFLEND 
FKRQPLMLWM YSHTGPILAK GDINKDGLDD VFISGDQNKP GSIWKQQTNG TFKQVEGLVI 
GDESISSVSA AVFFDANGDG YDDLYVAKGG YSLFEINTTS FQDELYMNDG KGNLTLAKTA 
LPNLAASSKA CVRPYDYDQD GDIDLFVGGR VVPGRYPEAP VSYLLQNTGT GQFRAVPIPF 
AKIGMVTDVK WADMNGDGRA DLVLCGEFMP IKIYLNTKDG FVDKTKQYFP EEEKGFWLSL 
TIADVNGDGQ NDILAGNLGT NSQIKYSSKE PVELVYADFD NNGSIDPFVS FYVQGTSYPF 
VSRDELNDQI YAMRKKFAFY KDYANATIST ILPADDLANA PKLTATECHS VCFLSKKGQF 
EKQILPIEAQ FAPVTNMLCE DFDRDGQLDV LLLGNKSDNR LKLGSMDANY GCLLKGDGKG 
GFTYVSQPAS GLSVIGDVKS VVDIGINQNR CLLIGAFNQP LQVYKKQKL