| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3033 |
|---|
| Symbol | |
|---|
| ID | 8726785 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 3674158 |
|---|
| End bp | 3675480 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003387843 |
|---|
| Protein GI | 284037913 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.715848 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGGA TGCTATTCAT TTATGTGTGG CTGGTGTTAA GCGTTTCGGC GAAGGCTGAA
GTAGCGACAA AAGACCTTAG CCAGCATCTT CAGCCAACGG TTTTTGCGGT AACCATGGTG
ATGATCCACG ATGTTGTCAA TCCGCCCGCT GCCAGCCGGT TTTATACTTA TTGCCTGCTG
GGTGCCCACG AAATTGTGGC CCGGCATCAG CAAACGGTAG TGTCGCCAAC TACGTTTATC
CGGAGCCTTG GACAGACAAA TCTGGAAACT GCCAGAGCGG ATAATTACCA GATTGCGGCT
CTGTACTGCA TTCTGGAAAC GGGGCGATTG ATTCTACCCT CAGGCTATAT GCTTGAGGAT
GAAGAAAAAA AGCTACTTGA TCAACTTCGG GCCGAGAAGT ACCCGGAGCC AATTATTCAG
CAATCGGTAG GTGTGGCACA GGAGATGGCG AAAAAAGTAC TGGCCTATGC CGCTGCCGAT
AATTACCGAA ACCTAAGCGC CCGCACCCGC TACCGACCGA GCAAAGCCGA TGGCTTCTGG
TATCCAACAC CACCGGCTTA TATTGAGGCC ATTGAGCCGC ACTGGCGCAT TATTCGCCCC
ATGATGATCG ATTCCTGCAG CCAGTTCAGG CCAAAGCCAC CCGTTGCCTT CAGTAAAGAC
ACAACTAGTG AGTTTCATAA ACTGGCACAG GAAGTATATC AGATAGGAAA TAAGCTGACC
GACGAACAAC GGTTTATCGC GTCGTATTGG GACTGTAATC CATTTGCCGT CAACACATCG
GGCCACATGT CGATTGGCTT TAAGAAGATA AGCCCCGGTG GTCACTGGAT GAACATAACA
AGTCTGGCAG CCACCAAGGC TAAATTATCG TTTGATAACG CTCTTATGGT ACAATCGCTG
GTTGCCATGA CGCTGATGGA TGCCTTCATC AGTTGCTGGG ACGAGAAGTA CCGCAGCAGC
CGAATCCGTC CCGAAACGGT CATTAATCGC TACATCAACG TGCGCTGGCA GCCACTCCTG
CAAACGCCAC CCTTTCCGGA ATATACCAGC GGCCATAGTG TTATCTCAAC CGCTGTGGCC
GAACTGCTAA CCTACCTGAT GGGTGATAAC TTCAGCTTTA CAGACAATAC TGAGGTGATT
TTTGAGCTTC CTGAGCGCCG GTTTACCTCG TTCCGACAGG CCGCTTCTGA AGCCGCTATC
TCCCGGTTAT ACGGTGGTAT ACACTACCGC GATGCTATTG AAAACGGGCA GGATCAGGGC
AGAGCTATCG GCGAGTTCGT TATTGAGCGC TTAAAGAAAG CGGGTATCAA GCCCATATTC
TGA
|
|---|
| Protein sequence | MKRMLFIYVW LVLSVSAKAE VATKDLSQHL QPTVFAVTMV MIHDVVNPPA ASRFYTYCLL
GAHEIVARHQ QTVVSPTTFI RSLGQTNLET ARADNYQIAA LYCILETGRL ILPSGYMLED
EEKKLLDQLR AEKYPEPIIQ QSVGVAQEMA KKVLAYAAAD NYRNLSARTR YRPSKADGFW
YPTPPAYIEA IEPHWRIIRP MMIDSCSQFR PKPPVAFSKD TTSEFHKLAQ EVYQIGNKLT
DEQRFIASYW DCNPFAVNTS GHMSIGFKKI SPGGHWMNIT SLAATKAKLS FDNALMVQSL
VAMTLMDAFI SCWDEKYRSS RIRPETVINR YINVRWQPLL QTPPFPEYTS GHSVISTAVA
ELLTYLMGDN FSFTDNTEVI FELPERRFTS FRQAASEAAI SRLYGGIHYR DAIENGQDQG
RAIGEFVIER LKKAGIKPIF
|
|---|
| |