| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3027 |
|---|
| Symbol | |
|---|
| ID | 8726779 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 3663217 |
|---|
| End bp | 3663882 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | transaldolase |
|---|
| Protein accession | YP_003387837 |
|---|
| Protein GI | 284037907 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.32955 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTTT TCATTGACAC AGCCAATCTG GCTGACATTC GCGAAGCCCA GGATATGGGC
ATTCTTGACG GTGTTACTAC TAACCCTTCA TTAATGGCGA AAGAAGGCAT TACGGGCAAA
GACAACGTAA TGCGTCATTA CAAACAAATC TGCGAAATCG TACAAAGCGA TGTTAGCGCC
GAAGTGATCT CGGTCAAATA CGACGAGATG ATCAAAGAAG GCGAAGAACT GGCTGATATC
GACGAGAACA TCGTCGTGAA AGTGCCCATG AGTGGCGATA GCATCAAAGC GATCAAATAT
TTCTCTGAAA AAGGAATCCG GACCAACTGT ACGCTAATCT TCTCGGCTGG TCAGGCTTTG
CTGGCTGCGA AAGCAGGTGC TACTTATGTG TCGCCGTTCG TAGGTCGTTT GGATGATATC
TCGACCGACG GTATGGCCCT CATCGAGCAG ATCGTCACTA TTTTCACCAA TTACGGCTAT
TCGACAGAAG TCCTGGCGGC TTCGGTTCGT CACCCGATGC ACGTAATTCA GTGTGCGGAA
ATTGGCGCTG ATATCATGAC GGCTCCCTTG AGCGTTATGA AACAACTGCT TAACCACCCA
CTCACCGACA GCGGTCTGGC TAAATTCCTG GCCGACCACG AGAAGGCTAA CCTGCCGGTG
AAATAA
|
|---|
| Protein sequence | MKFFIDTANL ADIREAQDMG ILDGVTTNPS LMAKEGITGK DNVMRHYKQI CEIVQSDVSA
EVISVKYDEM IKEGEELADI DENIVVKVPM SGDSIKAIKY FSEKGIRTNC TLIFSAGQAL
LAAKAGATYV SPFVGRLDDI STDGMALIEQ IVTIFTNYGY STEVLAASVR HPMHVIQCAE
IGADIMTAPL SVMKQLLNHP LTDSGLAKFL ADHEKANLPV K
|
|---|
| |