| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3013 |
|---|
| Symbol | |
|---|
| ID | 8726764 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 3649632 |
|---|
| End bp | 3650333 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase |
|---|
| Protein accession | YP_003387823 |
|---|
| Protein GI | 284037893 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAACCT TATATCTTAT TCCTACCCTC CTCGCCGACG ATACGGCCGA GCAGGTACTT
CCGCCACATA TTCGGGACGT TATCGAAAAA ACCGATGCTT ATTTCGTCGA GAATGTTCGT
TCTGCACGGC GGTTTATTAC TGGATTGAAA ACTAGTCGAG TTATTGACGA AACAACTTTT
TTTGAGCTTA GTAAAGACAC ACCACCCGCC GACACACGCC GACAGATTCA GGAAATGATG
GAGCGCAAAC GCAATGTTGG CGTCCTGTCC GAGGCAGGTT GTCCCGGTGT GGCAGATCCG
GGTTCTGTTG TTGTTGGCAT GGCCCATACG TTGGGCTGGC GAGTCGAACC CCTCGTTGGT
CCATCGTCTA TCTTGCTGGC GTTGATGGCG TCGGGTATGA ACGGTCAGTC GTTCATCTTT
CATGGTTATT TGCCCATTGA GCGGCAGGAC CGGGCGCGTG CCTTACGGTA TCTCGAAAAA
GAAGCGCAGG GCCGTCAACA AACACAGATT TTCATGGAAA CACCGTATCG AAACGATGCT
CTGTTTGCCG ATATACTGGC CAATTGCCAG GGTAATACCC GAATCTGTGT AGCCTGTAAC
CTGACCGGGC CAGATGCTTT TGTTCGTACC CTGACAGTAA AGGAATGGAA AACACAGGTG
CCCGACTTAC GTAAAAAACC AACGGTGTTT CTACTTTTGT GA
|
|---|
| Protein sequence | MPTLYLIPTL LADDTAEQVL PPHIRDVIEK TDAYFVENVR SARRFITGLK TSRVIDETTF
FELSKDTPPA DTRRQIQEMM ERKRNVGVLS EAGCPGVADP GSVVVGMAHT LGWRVEPLVG
PSSILLALMA SGMNGQSFIF HGYLPIERQD RARALRYLEK EAQGRQQTQI FMETPYRNDA
LFADILANCQ GNTRICVACN LTGPDAFVRT LTVKEWKTQV PDLRKKPTVF LLL
|
|---|
| |