Gene Slin_3007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3007 
Symbol 
ID8726758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3640761 
End bp3641756 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content52% 
IMG OID 
ProductPatatin 
Protein accessionYP_003387817 
Protein GI284037887 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGACA ACCCTACCCC GCCCCTTCCC CATCCGGCAG CTATTTCCAC CACGCCCCAG 
TCGTCCATGC GGGCTCTCGT CCTGGGCGGG GGGTCACTTA AAGGAGCATT TCAGGTAGGG
GCCGTAATGG CTCTTTTCGA GTCAGGTTTT GTACCCGATC AGCTTTATGG TATTTCGGTG
GGTAGTCTGA ACGCTACCTT TATTGCCCAC GAAGCTGCGC GTCAGCAAGC GGCAACCGGA
CACGTTGACT GGGAAAAAGT CGGTAAGTTT TTAATTGAAT TCTGGATTCG GAACATCACA
AAACCCGACG ATGTAGCCGT TATTCGTTCA CGCTTCCGAA TGGGATACGA TACGGTTATG
AGCCGTTTTG ATGGCTTACT GGATAACTCT CCCATCCAGA ATCTGATTCG GAATACTATA
GACGTTGAAG CGCTGAAAAC GGGGCCGGTA AAACTGAAAG TTGGGGCTGT CGATATTATC
GAAGGCGACA TGTGCTATGC CGACGCCAAT GATCCTAATT TCCTGGATTA CGTCTATGCC
AGCAGCTCAC TCCCGTTCCT GATGCCGGCC GTGCAAATCG GGGGCGACCA CCGACGGGCC
TTTCTGGATG GCGGGCTACG CGAAGTGGCT CCACTGCGGG TAGCGATTGA AGATGGTGCC
ACAGAAATTG CCTGTGTTGC GTGTCACGCC AAGAAAATCT ACAACGAAAA GTTCAATTAC
CGAAACCTGC TGAACCTCAT GGACCGGGTA AAAGACATTA CGGTGAATCA ATTGGTAAAC
AATGACATTG CCTGGGCCGA GCGCTTTGCC AGCCGGGAAC ACCTCCACGG GCGGGAACTG
GACCTGACGA TCATTCGCCC CACCGAACCG CTTTCCCTTA ACCTGATGAA GTTTACCTCC
GACGACATAG GCCGAATGAT CGTACAGGGA TATCAGGCCG GAACAGACAT GCTAAAGATA
AATAGAAAGA AAGGGGGGCC GACTGTGCTT CCTTAA
 
Protein sequence
MIDNPTPPLP HPAAISTTPQ SSMRALVLGG GSLKGAFQVG AVMALFESGF VPDQLYGISV 
GSLNATFIAH EAARQQAATG HVDWEKVGKF LIEFWIRNIT KPDDVAVIRS RFRMGYDTVM
SRFDGLLDNS PIQNLIRNTI DVEALKTGPV KLKVGAVDII EGDMCYADAN DPNFLDYVYA
SSSLPFLMPA VQIGGDHRRA FLDGGLREVA PLRVAIEDGA TEIACVACHA KKIYNEKFNY
RNLLNLMDRV KDITVNQLVN NDIAWAERFA SREHLHGREL DLTIIRPTEP LSLNLMKFTS
DDIGRMIVQG YQAGTDMLKI NRKKGGPTVL P