Gene Slin_3000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3000 
Symbol 
ID8726751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3632676 
End bp3633167 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content47% 
IMG OID 
Productphosphodiesterase, MJ0936 family 
Protein accessionYP_003387810 
Protein GI284037880 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.898077 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCA TCGGATTTTT ATCGGACACC CATAGCTATC TGGACCCTCA GGTTTTCACT 
CATTTTGAAG CTTGCGATGA GGTCTGGCAT GCTGGCGATG TTGGCAATAT GGAGGTCGCC
GATGCCTTAA AACGCTTTCG CCCTTTACGA ATTGTATGTG GTAACATTGA CAACGAATCA
ATTGAGTTAC CCTTAAACCA ACGTTTTACG CTGGAAGGGT TCGACATCTG GATGACACAC
ATTGGCGGAA CTCCCCCCAA TTACAATCCA ACCACGCGCC CACAACTCAA GGCAAGTCGA
CCCGATATTT TCATCTGTGG CCATTCGCAT ATTCTTAAAG TTGTTCGCGA TCCAGCCATG
AATAATTTAC TGTTCATGAA TCCTGGCGCA GCTGGCAAAA CGGGCTTTCA CAAAATGCGC
ACCGTTTTAC GCTTTTCGCT CGACGCCGGT CGTATTCTGG ACATGCAGGT TATTGAGCTG
GGTAAAAAGT AA
 
Protein sequence
MTRIGFLSDT HSYLDPQVFT HFEACDEVWH AGDVGNMEVA DALKRFRPLR IVCGNIDNES 
IELPLNQRFT LEGFDIWMTH IGGTPPNYNP TTRPQLKASR PDIFICGHSH ILKVVRDPAM
NNLLFMNPGA AGKTGFHKMR TVLRFSLDAG RILDMQVIEL GKK