| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2991 |
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| Symbol | |
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| ID | 8726742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 3616965 |
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| End bp | 3620213 |
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| Gene Length | 3249 bp |
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| Protein Length | 1082 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003387801 |
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| Protein GI | 284037871 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.40723 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCATG CTTTACGACA GAGTTACCAA AAACTGCCGC TGTTTATTTT CTGCTGGCTT
TTTTGCCTGG GAGCTTTTGC TCAGGAGAGA AAAATCACGG GGCGAATTAC AGATGGTAAT
GACAATAGCG CACTTCCCGG TGCAAACGTA GTTGTCAAAG GCACACAAAC GGGCGTAGTG
ACGGATGCCA ATGGGCAATT CTCCTTAAAC GTGGCAACCG GCCGGGACGT ACTCACAATT
TCGGCCATTG GCTATGCCTC ACAGGAAGTT ACCATTGGGG CGCGCACGTC GCTGAACATT
TCGTTATCCC CCGATATCAA AACGCTTAAT GAAGTTGTCG TAACGGGTTA TGGTGCACAG
GCCAAACGGG ATATTACGGG TGCCGTAGCA ACTGTCGATA CCAAACAACT CCTCTCGGTT
CCCTCAACCA ACGTTGGTCA GGCTCTACAA GGTCGTGTTG CGGGGGTTCA GGTAGGGAAT
GAAAACTCCC CCGGTGGCGG GGTCATGGTT CGTATCCGCG GTTTCGGTAC GATCAACGAT
AACTCGCCCC TGTACGTCAT TGATGGCGTG CCTACCAAAG GCAACCTGAA TACATTGAAC
CTGAATGATG TAGAGAGCAT GCAGATTCTG AAAGATGCGT CTGCTGCATC TATTTACGGC
TCACGCGCCG GTAATGGTGT GGTTATTATC ACAACCAAGA AAGGAAAAGC CGGAAAGCCC
AAATTTACGT ACGATACGTA CTACGGTTCG CAACGGCACG GTAAGCTGCT CGATATGCTG
AACACGCAGG AGTACGCCGA CCTGATCTGG GAATCCCGCA GAAACTCCGG TGTACTAGGC
CCCAATGGAA ACCCGGTTCA CTCGCAGTTT GGCAATGGTG TAACCCCGGT CATTCCGGAT
TTCGTGCTCC CTACTGGTGC CTCGGCCAAC GACCCTCGTT TAGCCCGAAA CCCGGATGGA
ACGTATGTCA ACTACAATAA CGACATCAGC TCGCCAGGTT TTCTGCTGAT TACGCCGTCC
AATAAAACAG GAACCAACTG GATGGAAGAG ATTTTTACCA CGGCCCCCAT CCAGAACCAT
CAGTTAGGCG TATCGGGAGG TAGTGAAAGC GGTCGTTACG CCATGTCGCT GAATTACTTC
AACCAGGATG GTATTATGAA GTATACGGGC TACAAACGCT ATTCGTTACG GGCTAATACC
GAGTTTAACG TCAACAAACG GGTTCGTGTT GGCCAGAACT TCCAGGTAGC TTATGGCGAG
CGCATTGGTC AGCCAAATGG TAATAACGCC GAAAGTAACC CCGTTTCGTT CGCCTACCGT
ATTCAGCCGA TCATTCCGGT TTATGACGTA GCCGGAAATT TTGCAGGTAC ACGCGGGGGT
GACCTCGACA ATGCCAATAA CCCGGTTGCC CTGCTGTACC GCAATAAAGA CAACGTTCAG
AAAGAAGTCC GGCTATTTGG TAATGCCTTC GCTGAAGTCG ACATCCTTAA AAACCTGACA
GCCCGCACTA GCTTCGGTAT TGATTACAAC CTTTATAACT ACCGAAACTA TACCATTCGG
GACATCGAAT CGGCCGAAGC ACGCGGTTCG AACCAGCTCC AGACCAACAA CAATTATGAA
TGGACCTGGA CCTGGTATAA TACGCTGACA TATAATGTTA ACCTCGGCGA CCGGCATCGT
TTCAATGTAA TCGCCGGTAC CGAGTCGATC AAAAACTATT TTGAAACCTA CGATGCTACC
CGGACAAATT TTGCGGTAGA CGACATCGAA AACCGCTACC TGAGTGCCGG TACGGGAGTT
CAGACCAACA ACGGAGGTGC GTCGAACTGG CGGCTGGCAT CGGAGTTTGC TAAAGTTAAC
TACGCGCTCG ACGATAAGTA TCTAATCGAC CTGACCGTCC GGCGTGACCG GTCGTCCCGT
TTTGCGAAGG AATTCCGGTC GGCGGTATTC CCGGCTGCGA GCGTAGGCTG GCGTGTTTCG
AAAGAAAACT TCTTTAAGCC ACTCACGCTG TTCGATGACT TGAAATTCCG CGCAGGTTGG
GGCCAGACGG GTAACCAGGA GATTGGTAAC TACAACTCGT TCACCCAGTT CAGCACAAAC
CCTATTACGT CGTTCTACGA CATCAACGGC ACGCGTACGT CGGCGGTGCC CGGTTATGAA
CTTACCCAGT TTGGTAACGC CAAAGCTAAA TGGGAAACCA CGACCAGCCT GAACATTGGT
TTCGACGCCA GCCTGCTTAA AAACAAGCTG ACCGTTGGCT TCGACTGGTA TACCCGCACC
ACCTCCGACA TGCTTTTCCC TGTTCAGGCC CCGCTCACTC AGGGCGTAGC CACGGTGCCT
TTCCAGAATA TTGGTTCGAT GCGTAACCGT GGTATTGACC TGATGATCAA TTACGGCGAT
AAGATCGGTT CCGGCGGCCT CACGTATAAT GTAGGTGCCA ACTTCAGCAC CTACCGCAAC
GTGGTAACGA AGACGAATGG TGATCCCAGC ACGCAGTACT TTGGTATTAA CGATGAGCGG
ATTCAGAACT TTGTGGTCAC CCAGCAAGAC TACGCTATTT CTTCCTTCTT TGGCTATACA
ATCGACGGCA TCTTCCAGAC CAACGAAGAA GCTAAAGCTG CGCCAATCCA GTTTGGTAAC
GCAGCCGCAG AGAACGTAGC TGGTCGCTTT AAATTCCGCG ACATCAATGG TGATGGTAAA
ATTGACACCA AAGACCTCAG CATCATTGGC AGTCCGCATC CGAAGTTCAC ATATGGCCTT
AATCTCAATC TGAACTATAA AAACTTCGGA CTAACCCTGT TTGGACAAGG GGTTGAGGGC
AATCAGATCT TCAATTACAC CAAATACTGG ACGGACTTCC CAACGTTTGG CGGTAACCGC
AGCTCCCGCA TGCTGTATCA ATCCTGGCGG CCCGGCAAAA CGGACGCTAT TCTGCCCCAG
CTTCGCTCAA GCGATCAGGT TAGTATCCAA CCGTCTACCT ATTACCTGGA AAGCGGCTCA
TATTTCCGGA TGAAAAACAT CCAGCTTACC TACCAGCTGC CACAGTCACT GCTCTCGAAA
CTGGGTGTTG GCGCTACCTC AATTTACATT CAGGGCCAGA ACATGTTCAC CATCACCAAA
TACTCCGGCA TGGACCCTGA AATTAACCTG CGTAGCTATT CGGCCGGTAA CGACCGCCAG
ATTGGCGTAG ATGGCGGCTC TTACCCGGTA GCCAAAACCG TATTAGTTGG TTTGAACCTG
TCATTTTAG
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| Protein sequence | MKHALRQSYQ KLPLFIFCWL FCLGAFAQER KITGRITDGN DNSALPGANV VVKGTQTGVV
TDANGQFSLN VATGRDVLTI SAIGYASQEV TIGARTSLNI SLSPDIKTLN EVVVTGYGAQ
AKRDITGAVA TVDTKQLLSV PSTNVGQALQ GRVAGVQVGN ENSPGGGVMV RIRGFGTIND
NSPLYVIDGV PTKGNLNTLN LNDVESMQIL KDASAASIYG SRAGNGVVII TTKKGKAGKP
KFTYDTYYGS QRHGKLLDML NTQEYADLIW ESRRNSGVLG PNGNPVHSQF GNGVTPVIPD
FVLPTGASAN DPRLARNPDG TYVNYNNDIS SPGFLLITPS NKTGTNWMEE IFTTAPIQNH
QLGVSGGSES GRYAMSLNYF NQDGIMKYTG YKRYSLRANT EFNVNKRVRV GQNFQVAYGE
RIGQPNGNNA ESNPVSFAYR IQPIIPVYDV AGNFAGTRGG DLDNANNPVA LLYRNKDNVQ
KEVRLFGNAF AEVDILKNLT ARTSFGIDYN LYNYRNYTIR DIESAEARGS NQLQTNNNYE
WTWTWYNTLT YNVNLGDRHR FNVIAGTESI KNYFETYDAT RTNFAVDDIE NRYLSAGTGV
QTNNGGASNW RLASEFAKVN YALDDKYLID LTVRRDRSSR FAKEFRSAVF PAASVGWRVS
KENFFKPLTL FDDLKFRAGW GQTGNQEIGN YNSFTQFSTN PITSFYDING TRTSAVPGYE
LTQFGNAKAK WETTTSLNIG FDASLLKNKL TVGFDWYTRT TSDMLFPVQA PLTQGVATVP
FQNIGSMRNR GIDLMINYGD KIGSGGLTYN VGANFSTYRN VVTKTNGDPS TQYFGINDER
IQNFVVTQQD YAISSFFGYT IDGIFQTNEE AKAAPIQFGN AAAENVAGRF KFRDINGDGK
IDTKDLSIIG SPHPKFTYGL NLNLNYKNFG LTLFGQGVEG NQIFNYTKYW TDFPTFGGNR
SSRMLYQSWR PGKTDAILPQ LRSSDQVSIQ PSTYYLESGS YFRMKNIQLT YQLPQSLLSK
LGVGATSIYI QGQNMFTITK YSGMDPEINL RSYSAGNDRQ IGVDGGSYPV AKTVLVGLNL
SF
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