Gene Slin_2990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2990 
Symbol 
ID8726741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3615007 
End bp3616764 
Gene Length1758 bp 
Protein Length585 aa 
Translation table11 
GC content52% 
IMG OID 
Productphosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I 
Protein accessionYP_003387800 
Protein GI284037870 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACTT CCCTTGACTC CCCTACTCAG CAACGCGTTG ATAAGTGGCT TAGCGGTAAT 
TATGATGCCG CCACCAAAGA ATCTATACAA CATCTGATCG ACTCGGGTAA TGTTACCGAA
CTAACCGACT CGTTCTACCG CGACCTCGAA TTTGGCACGG GTGGCCTGCG GGGTGTTCTG
GGCGTTGGCT CAAACCGCAT GAACCGCTAT ACGGTTGGTG CCGCTACGCA GGGGCTTTCC
AATTACATCA ATGCGGCCTT TCCAGGCCAG GATGTCAGCG TAGCCATTGC GCACGACAGC
CGCCGGATGA GTCCGGAGTT CGCCCGCCTG GTTGCCGATA TCTTTTCGGC GAATGGTATA
AAAGTGTACC TTTTTAGCAG CCTGCGGCCA ACGCCAGAGT TGTCGTTTGC CATTCGGCAG
TTGGGTTGCC AGAGCGGTAT TGTGGTAACA GCCTCGCACA ACCCGCCCGA GTACAACGGC
TATAAAGTGT ACTGGAATGA TGGCGGGCAG GTGGTTTCTC CCCACGACAA AGCCATTATT
GCCGAGGTGA ACAAGATTAC GTCCGTCGAT GACATCAAGT TTGACGGAAT CCCCGAACGG
ATCCACCTGA TCGACGAAGA AATTGACGCT CCTTATGTTG AGCGCGTTAA ATCCAATGCT
GTAAACCCGG ATGTGATCAA GCGGCAGGCT AACCTGAACA TCGTTTACAC GCCAATCCAC
GGAACAGGTA TCACACTCGT GCCCCGCGTT CTGGATGCGT TGGGTTTCAA CAATGTTCAT
ATCGTTGAGC AGCAGGCTAC GCCCGATGGA AATTTTCCAA CGGTGAAATC GCCTAACCCC
GAAGAACGGG CCGCTATGCA GCTGGCACTC GACCTGGCTA ATTCACTAAA TGCCGACCTC
GTGATGGCCA CCGACCCCGA TGCCGACCGT GTTGGTGCGG GTGCCCGCAA TCACCACGGC
GAGTTCGAAT TGCTGAACGG TAACCAGATG GCCAGCCTGA TTATTTACTA CCTGCTCAAC
GCCTGGAAAG ATGCGGGGAA ACTGACGGGA AAAGAGTTTG TTGCCAAGAC CATCGTTACC
ACCGACCTCA TCGACAAGAT GTGCGAACGC TACGGGGTAA ACTGTTACAA TACCCTGACA
GGCTTTAAAT ACATTGCCGA GGTTATCCGT GAACTGGAAG GCAAAGAACA GTTCATTGGC
GGTGGCGAAG AAAGTTACGG CTACCTGATC GGTGATTTCG TACGCGATAA AGACGCCATC
GCGTCCTGCG CTATCATTGC CGAACTAACT GCCTATGCCA AAGACCAGGG CAAAAGCCTG
TTCGACATGC TGATGGCCAT GTATCAGGAG AATGGCTTCT ACTACGAAGC ACTGGTTTCA
CTGACCAAAA AAGGTAAATC GGGTGCCGAA GAGATTCAGC AGATGATGGC CGACTTCCGG
GCCAACCCAC CTAAATCAAT TGCCGGTTCA GCCGTTGTTC GGGTAGACGA CTACAAAGCC
CTGACCCGCC TTGATCCCAA AACCGGACAA ACAACCGTTA TCGAATCTGG TAAAATGGGT
ATTGAGCCTT CAAACGTGCT GCAATTCTTT ACGGAAGATG GCACCAAAGT ATCCGCTCGC
CCGTCGGGAA CAGAACCTAA AATTAAGTTC TATGTAAGTG TCGTAGAACC TCTGGAGAGC
AAAGAAGCTT TCGATGAAAC TTACGCACAG TTGAAAGCAA AAGTGCAGCG TGTTATTGAT
GAGCTACAAC TCGTATAA
 
Protein sequence
MTTSLDSPTQ QRVDKWLSGN YDAATKESIQ HLIDSGNVTE LTDSFYRDLE FGTGGLRGVL 
GVGSNRMNRY TVGAATQGLS NYINAAFPGQ DVSVAIAHDS RRMSPEFARL VADIFSANGI
KVYLFSSLRP TPELSFAIRQ LGCQSGIVVT ASHNPPEYNG YKVYWNDGGQ VVSPHDKAII
AEVNKITSVD DIKFDGIPER IHLIDEEIDA PYVERVKSNA VNPDVIKRQA NLNIVYTPIH
GTGITLVPRV LDALGFNNVH IVEQQATPDG NFPTVKSPNP EERAAMQLAL DLANSLNADL
VMATDPDADR VGAGARNHHG EFELLNGNQM ASLIIYYLLN AWKDAGKLTG KEFVAKTIVT
TDLIDKMCER YGVNCYNTLT GFKYIAEVIR ELEGKEQFIG GGEESYGYLI GDFVRDKDAI
ASCAIIAELT AYAKDQGKSL FDMLMAMYQE NGFYYEALVS LTKKGKSGAE EIQQMMADFR
ANPPKSIAGS AVVRVDDYKA LTRLDPKTGQ TTVIESGKMG IEPSNVLQFF TEDGTKVSAR
PSGTEPKIKF YVSVVEPLES KEAFDETYAQ LKAKVQRVID ELQLV