| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2980 |
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| Symbol | |
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| ID | 8726731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 3600345 |
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| End bp | 3604280 |
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| Gene Length | 3936 bp |
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| Protein Length | 1311 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | |
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| Product | histidine kinase |
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| Protein accession | YP_003387791 |
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| Protein GI | 284037861 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.229379 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.450681 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGTCC AACGGATAAC GTTGGTCGTT TTGCTATGGG TATACTTTAC GTTGGCATCC
GCTCAGATCG TACAACGGCT TACCACAGCA ACCGGCCTGC CTAACTCAAC AATTACCGGA
CTGGTACAAG ATCAGGCCGG ATTCATCTGG GTTAGTACTG CCGATGGGCT AGCACGCTAC
GACGGTCAGA ACATCAGGGT TTTTCGTCGT GAGCAACAGG CAAACTCATT AACCGAGAAT
TCTATTGTTC ACTTACAAAA ACTTACCGAC GGCACTTTCC TCGTGCAGAC ACATGCGGGC
AACTTTCAAC GTTTCAATCC TGAAACGGAG CAGTTCAAAA AATTCTTACC GGTTCAGCAG
CAGGGACAAC AACGGATAGA AGATGGATTC GTGACTGCCG ACGGAAACGG ATTTTGGGCG
CTGTGGCGGG GCATTAAAGT TCAGTACTAC GACCTTAAAC GGCACCATAT CCGGCTCTGG
ACTGAACAGC AATTAGGCCC AAATACCCGG TTTATGGACT CCATGCTGCC TGCCTCAACG
GGATACGTTT ATGTGCATAA TCACCAGGGA ATCGTTGAGA TTAATTCGAT TAACGGAACC
CATCGGGAGT TTCCATTCCC GGGTCTGCTA ACGCACTGGA TGAGCCGCGC CATGTTAGCC
CCAGACGGTG TCATCATGGC CGAACGGGCG AATGGCGATA TACTGATTTT AGGCAGACAC
CACCTGCTGA TTCTGAACCC AAAAACCGGC CGCTATCAAA ATGTGCCGAT TCCAGACCCC
GTTGTTCCTA AAGAAGGATA TGGCATCCGG GTGCTGGCGG ATGGAAATGT GTATGTAGGC
GCTGGCCACC GACTCTATCT CTTTACATCC GCCAACCAGT TTGAGTTGAA GTATGAACGG
CCTAAAGGAA CCCGACAAAT ACCGGCTTAC ACAATCCCGT ACCTACTGGA CCGCTCCGGG
GTGTACTGGT TATTGACAGA AGACGGTATT GTTCAGGTCG ACTCCCGCAA AGCGCCCTTC
GAAGCCTATC GGTACGAGGT TGACTGGAAG ACCGATCTGT TGAAGAAGGT GCTTGGTATA
ACTCCACCTT CCTGGAAAGA CTCCAGTGGC GACAGCTGGA CACGATTTAC CTATGACCTT
AACAAACTTT GGTTCATTGA CGTCGCTTCG TTGTACCAGT GTGCCCCGCA GCAGCAGTTA
CGCCGAATAT CCAGTGACTA TACCGGCGAC AGTTGCGCCT GCAAGATTAC CTTAAAAATG
GACCGGAGAG GTCATTTATG GATCTACGGG AATGCGAAAG GCGGGTTGAT GGACATTGAG
CCAACAACTC AAACCCGACG AATCTGGCAA AAGAGTTTTG TTCCTCTGAC GTTTGTGAAT
CCCGGCCTCG ATTTGTGTGA CATTCAGCCC ATGGGAAACA CGGTCTGGAT GGCTTCCTAT
CAGGGAAAAG GGTTGTATAA CTACTCTCTT GAGCAAAAAA AGATCGTCGC ACAGCTGCTG
CACGATCCTG CCGATAGCCA CTCATTACCC AGCAATCAGC TACTCTGCCT ACTGGCCGAC
CCCCAGCAGC CAGAAACAGT GCTGTGGCTG GGAACGGTAG ATGCCGGGTT GGTCCGGTTT
GATACAAAGA CGGGTATTTT CCGAACCTTC ACCCGGCAAA CAGGCCTTCC GAACAACACC
ATCAATAGTT TACAGACCGA TGAACAGGGT TTTATTTGGG CAGCGACCAA CAACGGGTTG
ATACGCCTGA ACCCCGACAC CTTTCAGATG CGCCTGTTCT CACGCGCCGA TGGCTTGCAG
GATGATGAAT TTGTGTTTGC CGCGTCTACC CAATTACCCG ATGGACGTCT GGCATTCGGT
AGCCCGTCAG GTATGACAAT TTTCAGGCCG GCCGCCATTC AGGAGGATAC GTTTGCTCCA
CCGGTCGTTC TATCGGCCCT ACGCATTAAC AATGAACTGG TAGAAGTCAA CGACACCCTC
CCCGTTTTAT CAGAGCCGAT CAATACGATT AAACGCCTGG TTCTCCGCTA CAGCCAGAAC
TTTCTGACGT TCGAGTTTGC CGCTTTACAA TTTAACAAGC CCGACAAGAT TCACTACCGA
TACCGACTGA CGGGCGTTGA CCGGGACTGG GTCGATGCGG GAATCCGACA TACGGCCAAT
TATACCCAAC TCCGGCCGGG TAATTACCTG TTTGAGGTAA TGTCTACCAA TACAGATGGC
CGGTGGAGCC GAAACACAAA ACAATTGGCG ATTCGCATCA TGCCCCCATT ATGGGCGAGC
TGGTGGGCTT ACGTAGTATA TATCCTCACA TTTGGCGGGT GCCTGACTGG CCTTGTACGA
TTTCGAAATA AACAGCGCCA TCAGAAACAG GAGGCCGCAC AGCTTAAAAC CCTGAACGAA
CTAAAAACGC GTTTTTTTGA TAACATCACC CACGAGTTCA GGACACCTTT ATCCCTCATT
CTTTCGCCAA CTGAAAAGTT GCTGAGTGAA TCGAAACATG ATGGGCCGAC TCGCCAGGCA
CTGGCAACGA TAAAACGGAA CGGTACCCTG CTTCTGCGCC TGATCAATCA ACTACTCGAT
TTATCGAAGC TGGAAGCGGG CGGCATGACC GTATCCCTGG TACGATGCAA CATACCCCAA
TTTATCAGTC AGTTAGTTGA ATCGTTTCGG CCAGTTGTAG TGCAAAAGGG CATTAAGTTG
CTCGTTACGG TCGAAGAAAG CCAGCAGGAG CATCTGTTCG ATATGGATAA GTGGGCAACC
ATTCTCACAA ATTTGCTGTC CAATGCTCAG AAATTCACCA GTGCGGGCGG CTGCATAACG
GTTACGGTAA GCAGCCCGGA CGAACACTCC CGGTGTGTAA CCATTTCGGA CACCGGCATT
GGGATACCGG CAGACAAACT GCCTTATATA TTTGACCGTT TTTTTCAGAT TGACGACACT
CAAACCCGCG CTTACGAAGG AACAGGCATC GGTCTTGCTC TGGTCAAGGA ACTCCTTCAT
AGGCTGGGCG GGAGCATCAA CGTGGTGAGC CAGCCTGGCG CAGGCACTAC GTTTACCGTT
TTACTGCCCG TTTTGGCTTC TCATCCCGAT GCAGACATAC CGACAGTAAC AGAATCGCTT
TATGTATCTG ACATAGCTAC GTATATGCCA GACCGTCCGC TGGTTCATAC TGAGAGTTCA
TCGGCAAATA TGCCATTGAT TCTGGTTGTG GAAGACAATA TTGAGCTTCG TGATTTTATT
GCTAATGAGC TGAGTCAATC TTACCGGGTT CTGACTGCTC GAAATGGACA GGAAGGTTGG
GAACAGGTAA GAAGTGAACT GCCGGATGTA GTTATTTCAG ATATCATGAT GCCGGACTTG
GATGGCTACG CACTCACCCG GCAACTAAAA ACGAATACCC TCACCAATCA CATTGCCGTG
ATACTGCTCA CGGCCCGAGC TTCCCAGGAG AGCCGGATGA ATGGGTTGAT GCAGGGCGCG
GATGACTATC TGACCAAACC TTTTAGCATT AGTGAATTAA AGCAGCGAAT TTGTAACCTG
CTCACCCGAC AACAAGCGCT GCGGGCCTAT TACGTGCAGC AAATCACGGA GTCAGATTTA
CCTTTATCTA CCGAAACCTT AGCTGATGGC TTTATGCAGC GACTCTACGA GGTTATCGAC
ATACACTTGT CTGACAGCGC CTTCGGAGTA GAGGAACTGG CTTATCAAAT GGGTATAAGC
CGACGTACGC TCCATCGTAA ACTGACGGCT ACGGTCAACC AGTCGGCCAA TGATGTGATT
CGCCAGCATC GGTTAAAGCG GGCCGCCCAA CTTCTGCTGG CGGGTCATAA TGTATCCGAA
ACAGCCTATC TCGTCGGGTA CGAGAGCCCG GGGCATTTCT CACTGATTTT CAGGGATTTT
TACCAACGAA CACCGACAGA ATATATTCAA CGGTAG
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| Protein sequence | MNVQRITLVV LLWVYFTLAS AQIVQRLTTA TGLPNSTITG LVQDQAGFIW VSTADGLARY
DGQNIRVFRR EQQANSLTEN SIVHLQKLTD GTFLVQTHAG NFQRFNPETE QFKKFLPVQQ
QGQQRIEDGF VTADGNGFWA LWRGIKVQYY DLKRHHIRLW TEQQLGPNTR FMDSMLPAST
GYVYVHNHQG IVEINSINGT HREFPFPGLL THWMSRAMLA PDGVIMAERA NGDILILGRH
HLLILNPKTG RYQNVPIPDP VVPKEGYGIR VLADGNVYVG AGHRLYLFTS ANQFELKYER
PKGTRQIPAY TIPYLLDRSG VYWLLTEDGI VQVDSRKAPF EAYRYEVDWK TDLLKKVLGI
TPPSWKDSSG DSWTRFTYDL NKLWFIDVAS LYQCAPQQQL RRISSDYTGD SCACKITLKM
DRRGHLWIYG NAKGGLMDIE PTTQTRRIWQ KSFVPLTFVN PGLDLCDIQP MGNTVWMASY
QGKGLYNYSL EQKKIVAQLL HDPADSHSLP SNQLLCLLAD PQQPETVLWL GTVDAGLVRF
DTKTGIFRTF TRQTGLPNNT INSLQTDEQG FIWAATNNGL IRLNPDTFQM RLFSRADGLQ
DDEFVFAAST QLPDGRLAFG SPSGMTIFRP AAIQEDTFAP PVVLSALRIN NELVEVNDTL
PVLSEPINTI KRLVLRYSQN FLTFEFAALQ FNKPDKIHYR YRLTGVDRDW VDAGIRHTAN
YTQLRPGNYL FEVMSTNTDG RWSRNTKQLA IRIMPPLWAS WWAYVVYILT FGGCLTGLVR
FRNKQRHQKQ EAAQLKTLNE LKTRFFDNIT HEFRTPLSLI LSPTEKLLSE SKHDGPTRQA
LATIKRNGTL LLRLINQLLD LSKLEAGGMT VSLVRCNIPQ FISQLVESFR PVVVQKGIKL
LVTVEESQQE HLFDMDKWAT ILTNLLSNAQ KFTSAGGCIT VTVSSPDEHS RCVTISDTGI
GIPADKLPYI FDRFFQIDDT QTRAYEGTGI GLALVKELLH RLGGSINVVS QPGAGTTFTV
LLPVLASHPD ADIPTVTESL YVSDIATYMP DRPLVHTESS SANMPLILVV EDNIELRDFI
ANELSQSYRV LTARNGQEGW EQVRSELPDV VISDIMMPDL DGYALTRQLK TNTLTNHIAV
ILLTARASQE SRMNGLMQGA DDYLTKPFSI SELKQRICNL LTRQQALRAY YVQQITESDL
PLSTETLADG FMQRLYEVID IHLSDSAFGV EELAYQMGIS RRTLHRKLTA TVNQSANDVI
RQHRLKRAAQ LLLAGHNVSE TAYLVGYESP GHFSLIFRDF YQRTPTEYIQ R
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