Gene Slin_2977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2977 
Symbol 
ID8726728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3595630 
End bp3596823 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content51% 
IMG OID 
ProductAldose 1-epimerase 
Protein accessionYP_003387788 
Protein GI284037858 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.416586 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTAC ATCACGTTTC TGAGCTACTC AAATTCAGCA TGGTAATGAA ATTTCTTTAT 
CCTACCCTCT TCTGCACGTT CGTGTTGGGC ATCCTGTGTG GTTACGCCCG ACCCAAGCCC
ACTCCACCGA CAAAAAAAAT GGCTGGTATT GAAAAAACAC TCTTTGGAAA ATTCCCCGAT
GGTCGTGAAG CCGACCTGTT CACCCTCCGA AATGCGGCTG GCATGACCGT TAAAATCACT
AATTATGGCG GGTATATCGT GTCGATGACA GCACCCGACA AATCAGGCAA CTTTGAAGAC
ATCATTCTGG GGATGCCCAC CTTTGCCGAT TACCTGAAAG GCACCCCTAG CCTGGGTCCA
ATTATTGGCC GGTTTGGCAA TCGGATTGGC GGGGCTAAGT TCACACTGGA TGGAAAGGAA
TATGTACTGG CCGCCAACAA CCGGACTAAT CACATTCACG GCGGACCCGC CGGGTTCGAC
AAGAAATTGT GGAATGCCAC GCCTGTAGAC GGGGATCAAC CAATGCTCAA ACTCACTTAC
ACCTCCGCCG ATGGTGAAGA AGGTTACCCC GGAAATTTGT CTGTACAGGT TGCTTATACC
CTGCAAAAAG ATAACTCCCT CCGCATTACC TATCTGGCAA CTACCGATAA ACCAACCGTG
TTGAACCTGA CTAATCACGC CTACTTTAAC CTGTCGGGCA TGAAGCGGGA TGTGCTGGGC
TACGAGCTGA TGATCAAAGC GAATTCGTAT CTGCCCACCG ACGCCCGCCA GATTCCAACA
GGCGAGATCC AGCCGGTAAA AGGAACCCCT TTTGACTTTA CCATACCTAC CGTAGTAGGT
ACCCGCATAA ACGACACGAC GAACGTTCAG ATCAAATATG GTTCGGGCTA CGACCACTGC
TGGGTACTTG ACGGCCCCGC CAACAAACTC AGACTGGGGG CGACGGTACA CGACCCGGAA
AGTGGCCGAC TCATGACGAT GTACACTACC GAACCGGGGG TACAGGTTTA TACGGCCAAC
CACCTGAACG GCCTGAAAGG AAAAGAAGGG GTTGCTTATA CGAAACGCTT TGGTATTTGC
CTCGAAACGC AACATTTTCC CGACTCACCC AACAAACCCA ATTTCCCATC AACGGTTCTC
CGGCCGGGCG AGACGTATCG AAGTACAACA GTCTACCACT TTTCGGCTAA ATAG
 
Protein sequence
MTLHHVSELL KFSMVMKFLY PTLFCTFVLG ILCGYARPKP TPPTKKMAGI EKTLFGKFPD 
GREADLFTLR NAAGMTVKIT NYGGYIVSMT APDKSGNFED IILGMPTFAD YLKGTPSLGP
IIGRFGNRIG GAKFTLDGKE YVLAANNRTN HIHGGPAGFD KKLWNATPVD GDQPMLKLTY
TSADGEEGYP GNLSVQVAYT LQKDNSLRIT YLATTDKPTV LNLTNHAYFN LSGMKRDVLG
YELMIKANSY LPTDARQIPT GEIQPVKGTP FDFTIPTVVG TRINDTTNVQ IKYGSGYDHC
WVLDGPANKL RLGATVHDPE SGRLMTMYTT EPGVQVYTAN HLNGLKGKEG VAYTKRFGIC
LETQHFPDSP NKPNFPSTVL RPGETYRSTT VYHFSAK