Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2977 |
Symbol | |
ID | 8726728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 3595630 |
End bp | 3596823 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | Aldose 1-epimerase |
Protein accession | YP_003387788 |
Protein GI | 284037858 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.416586 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTTAC ATCACGTTTC TGAGCTACTC AAATTCAGCA TGGTAATGAA ATTTCTTTAT CCTACCCTCT TCTGCACGTT CGTGTTGGGC ATCCTGTGTG GTTACGCCCG ACCCAAGCCC ACTCCACCGA CAAAAAAAAT GGCTGGTATT GAAAAAACAC TCTTTGGAAA ATTCCCCGAT GGTCGTGAAG CCGACCTGTT CACCCTCCGA AATGCGGCTG GCATGACCGT TAAAATCACT AATTATGGCG GGTATATCGT GTCGATGACA GCACCCGACA AATCAGGCAA CTTTGAAGAC ATCATTCTGG GGATGCCCAC CTTTGCCGAT TACCTGAAAG GCACCCCTAG CCTGGGTCCA ATTATTGGCC GGTTTGGCAA TCGGATTGGC GGGGCTAAGT TCACACTGGA TGGAAAGGAA TATGTACTGG CCGCCAACAA CCGGACTAAT CACATTCACG GCGGACCCGC CGGGTTCGAC AAGAAATTGT GGAATGCCAC GCCTGTAGAC GGGGATCAAC CAATGCTCAA ACTCACTTAC ACCTCCGCCG ATGGTGAAGA AGGTTACCCC GGAAATTTGT CTGTACAGGT TGCTTATACC CTGCAAAAAG ATAACTCCCT CCGCATTACC TATCTGGCAA CTACCGATAA ACCAACCGTG TTGAACCTGA CTAATCACGC CTACTTTAAC CTGTCGGGCA TGAAGCGGGA TGTGCTGGGC TACGAGCTGA TGATCAAAGC GAATTCGTAT CTGCCCACCG ACGCCCGCCA GATTCCAACA GGCGAGATCC AGCCGGTAAA AGGAACCCCT TTTGACTTTA CCATACCTAC CGTAGTAGGT ACCCGCATAA ACGACACGAC GAACGTTCAG ATCAAATATG GTTCGGGCTA CGACCACTGC TGGGTACTTG ACGGCCCCGC CAACAAACTC AGACTGGGGG CGACGGTACA CGACCCGGAA AGTGGCCGAC TCATGACGAT GTACACTACC GAACCGGGGG TACAGGTTTA TACGGCCAAC CACCTGAACG GCCTGAAAGG AAAAGAAGGG GTTGCTTATA CGAAACGCTT TGGTATTTGC CTCGAAACGC AACATTTTCC CGACTCACCC AACAAACCCA ATTTCCCATC AACGGTTCTC CGGCCGGGCG AGACGTATCG AAGTACAACA GTCTACCACT TTTCGGCTAA ATAG
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Protein sequence | MTLHHVSELL KFSMVMKFLY PTLFCTFVLG ILCGYARPKP TPPTKKMAGI EKTLFGKFPD GREADLFTLR NAAGMTVKIT NYGGYIVSMT APDKSGNFED IILGMPTFAD YLKGTPSLGP IIGRFGNRIG GAKFTLDGKE YVLAANNRTN HIHGGPAGFD KKLWNATPVD GDQPMLKLTY TSADGEEGYP GNLSVQVAYT LQKDNSLRIT YLATTDKPTV LNLTNHAYFN LSGMKRDVLG YELMIKANSY LPTDARQIPT GEIQPVKGTP FDFTIPTVVG TRINDTTNVQ IKYGSGYDHC WVLDGPANKL RLGATVHDPE SGRLMTMYTT EPGVQVYTAN HLNGLKGKEG VAYTKRFGIC LETQHFPDSP NKPNFPSTVL RPGETYRSTT VYHFSAK
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