Gene Slin_2970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2970 
Symbol 
ID8726721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3587647 
End bp3588468 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content52% 
IMG OID 
Productprotein serine/threonine phosphatase 
Protein accessionYP_003387781 
Protein GI284037851 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.489597 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCT ATCGAGCATT TCCAATGGCT TTTTCGCACC TCGGCCAACG GACCAATAAC 
CAGGATTACC TGTATCCGAA TGTCGACAAG GCGACTGAGC AAACAGAGCT TTTTGTCGTT
TGTGACGGAA TGGGCGGGGC CGACAAGGGG GAAGTGGCCA GTAAGCTGCT CTGTGAGGCC
GTAGCAGACT ATGTTATAAC GATGGGCAAC CCAACGCTGG ATGCCGCCCA CATACAGGTC
ATACTCAACC GAGCTTACGA GGCTTATCGC ACCTATCTGG CACAGAACCC TTTGCTTAGC
CGGATGGGGT CAACGCTGGC GTTGCTGCAA CTGCACCAAC AGGGCGCTAC GATCTGTCAT
ATTGGTGATA GCCGGGTGTA TCAACTGCGG GCGGGTCAGG TGATTTTTCA GACTAAGGAT
CACCGACAGG TCGAAGATAT GGTTGAGGCT GGTATCATCA CGGCCACGCA AGCCCTAACG
CACCCCTGGC GAAATCGACT GAGTCGGGCA GTTATGGCGA GTGTGACGGA TAAGGAAGGC
GAGCCTGTAA AACTGATGGC CGATATCGTT ACACTGACCG ATGTTCAGGC GGGCGATTAT
TTCTTTATGT GCACCGATGG CGTTCTCGAA GCCATCGATA CGTATATTCT GGAAACCGTA
CTGGCCAGCA ACATGCCCGA CCAGGCCAAG TCGGAGTCAT TGCAGGCCCT CTGTAGTGCG
CACTCAAAAG ATAATTACTC CGGTTATCTG ATCGGTATTA GTTATGTAGC TCATACCGAT
TCGGCGCAGT CTATCCATAC CATCACGAAT TATGCTGACT AA
 
Protein sequence
MKIYRAFPMA FSHLGQRTNN QDYLYPNVDK ATEQTELFVV CDGMGGADKG EVASKLLCEA 
VADYVITMGN PTLDAAHIQV ILNRAYEAYR TYLAQNPLLS RMGSTLALLQ LHQQGATICH
IGDSRVYQLR AGQVIFQTKD HRQVEDMVEA GIITATQALT HPWRNRLSRA VMASVTDKEG
EPVKLMADIV TLTDVQAGDY FFMCTDGVLE AIDTYILETV LASNMPDQAK SESLQALCSA
HSKDNYSGYL IGISYVAHTD SAQSIHTITN YAD