Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2970 |
Symbol | |
ID | 8726721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 3587647 |
End bp | 3588468 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | protein serine/threonine phosphatase |
Protein accession | YP_003387781 |
Protein GI | 284037851 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.489597 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAATCT ATCGAGCATT TCCAATGGCT TTTTCGCACC TCGGCCAACG GACCAATAAC CAGGATTACC TGTATCCGAA TGTCGACAAG GCGACTGAGC AAACAGAGCT TTTTGTCGTT TGTGACGGAA TGGGCGGGGC CGACAAGGGG GAAGTGGCCA GTAAGCTGCT CTGTGAGGCC GTAGCAGACT ATGTTATAAC GATGGGCAAC CCAACGCTGG ATGCCGCCCA CATACAGGTC ATACTCAACC GAGCTTACGA GGCTTATCGC ACCTATCTGG CACAGAACCC TTTGCTTAGC CGGATGGGGT CAACGCTGGC GTTGCTGCAA CTGCACCAAC AGGGCGCTAC GATCTGTCAT ATTGGTGATA GCCGGGTGTA TCAACTGCGG GCGGGTCAGG TGATTTTTCA GACTAAGGAT CACCGACAGG TCGAAGATAT GGTTGAGGCT GGTATCATCA CGGCCACGCA AGCCCTAACG CACCCCTGGC GAAATCGACT GAGTCGGGCA GTTATGGCGA GTGTGACGGA TAAGGAAGGC GAGCCTGTAA AACTGATGGC CGATATCGTT ACACTGACCG ATGTTCAGGC GGGCGATTAT TTCTTTATGT GCACCGATGG CGTTCTCGAA GCCATCGATA CGTATATTCT GGAAACCGTA CTGGCCAGCA ACATGCCCGA CCAGGCCAAG TCGGAGTCAT TGCAGGCCCT CTGTAGTGCG CACTCAAAAG ATAATTACTC CGGTTATCTG ATCGGTATTA GTTATGTAGC TCATACCGAT TCGGCGCAGT CTATCCATAC CATCACGAAT TATGCTGACT AA
|
Protein sequence | MKIYRAFPMA FSHLGQRTNN QDYLYPNVDK ATEQTELFVV CDGMGGADKG EVASKLLCEA VADYVITMGN PTLDAAHIQV ILNRAYEAYR TYLAQNPLLS RMGSTLALLQ LHQQGATICH IGDSRVYQLR AGQVIFQTKD HRQVEDMVEA GIITATQALT HPWRNRLSRA VMASVTDKEG EPVKLMADIV TLTDVQAGDY FFMCTDGVLE AIDTYILETV LASNMPDQAK SESLQALCSA HSKDNYSGYL IGISYVAHTD SAQSIHTITN YAD
|
| |