| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2969 |
|---|
| Symbol | |
|---|
| ID | 8726720 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 3586872 |
|---|
| End bp | 3587657 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | peptidase C14 caspase catalytic subunit p20 |
|---|
| Protein accession | YP_003387780 |
|---|
| Protein GI | 284037850 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.368497 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGACTA ATTTACTCCT GGCGTTGAGT TTGTTGCTGC CTGCTCAGCA ACGGGCGTTT
ACCGGGCAAA CCTATGCCGT TGTTGTTGGT ATTTCCGACT ATAAAGCCCT GTCTTATGCA
ACCGGCGATT TACGGTTTGC TGATCGGGAT GCCCGCCAGT TTGCGGCTTT TCTGCAAAGT
AAATCGGGTG GGAGCGTACC CGCTTCCAAC ATTCGGCTGC TGACAAATCG CCAGGCTACG
CAGGCCGCTA TTGAGCAGCA GCTTGCTGTG TTTCAGCAGG CTACGGAAGC GGATCGAATC
ATTCTCTATT TTTCGGGACA CGGTATGCCA GACAGTTTTG TCCCCTACGA CGTTGAACCT
GGCAAGCCTG ATGGCTTACT CACGTACCGG GATATAAAAA CCGCCTTTTA CCGCTCCGGC
GCGAAAACAA AATTATGCAT TGCTGATGCC TGCCTCTCGG GCGGTATGAC CCGGAAACTG
ACAGCCCGGC GGGAGGCCCA ACAGCTTGTT ACCCCAAGCC AGACAGATCG CAGTAACGTA
GCCATGCTAC TGGCCAGCCG ATCTACCCAA TTGGCCGTTG AGGATAGTCG GCTGGCGGGT
GGGGCCTTTA CGTATTTCCT GCTGCGGGGC CTGTCCGGTA AGGCCGACCT CGACGGAAAC
GGCATTGTCA CCATTAAAGA ATTACACCAA TACGTATCTC CGCAGTTGAA GAAGCGAACG
CAGGGACGGC AAACGCCCAT GTTTTACGGG CGCTTTTCGG ATAGCCTGCC ATTGGCCTAT
CGTTGA
|
|---|
| Protein sequence | MLTNLLLALS LLLPAQQRAF TGQTYAVVVG ISDYKALSYA TGDLRFADRD ARQFAAFLQS
KSGGSVPASN IRLLTNRQAT QAAIEQQLAV FQQATEADRI ILYFSGHGMP DSFVPYDVEP
GKPDGLLTYR DIKTAFYRSG AKTKLCIADA CLSGGMTRKL TARREAQQLV TPSQTDRSNV
AMLLASRSTQ LAVEDSRLAG GAFTYFLLRG LSGKADLDGN GIVTIKELHQ YVSPQLKKRT
QGRQTPMFYG RFSDSLPLAY R
|
|---|
| |