Gene Slin_2965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2965 
Symbol 
ID8726716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3581208 
End bp3581999 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content52% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003387776 
Protein GI284037846 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.886071 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.911505 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTAT CGGAAGATCA ATACGAGATT ATTGAAGCGT ATTTAACCAA CGAATTATCA 
GCACCCGACC GGGCTTCGTT CGAGCGTGAC CTACTAACGG ATGCGGAGCT TCGGGCGGAG
GTTGACCGGC AGCGCACCAT CCGGATGGGC TTACGGGCGC TGGGAATTGA ACGGGCACTT
GAACGGGCAA AAAGCCAGTA CAAAGCGGAG TTGGAGCGGA CTGAAACAGC ACCGGCCGAG
CAGCCCGTTG TCCGGCCCTT CATCAGTTGG CGGTATTGGG CTGCGGCAGC CTCTATCGTC
GCCGTATTGG GAGCGGGATA CTATACTTAC CAGCAAACTA TTGGTCAACA ATCAGATATC
GCTTTCGCAG AAACACTCGC ATCTGACCCG GCAGCTGAGT TAACAAAAGA CTTTCCGGCT
GGTGCGCTTA CACCCTCCAC CCGTACCGAG TTTCTGGAGG CCCTAAAAAA ATACAAAGCG
GGTAAATACG ATGAAGTAAT CGCCCGGCTT AAGACCCTCC CCGCCGACAA ACAGTCGATA
CATTACAAAA ACTATTTTCT CGGTTTGAGT TACCTGGCTA ATAAACAACC CGGTGCAGCC
ATTCCCTTGC TGAGTAAGGC CCAGGCAAGT TCTTCGCTAG CCATCCGGCA AAAAGCGGAG
TGGTTTCTGG CGCTGGCGTA CGTCAAGAAT GAGCAAAAAG AGAAGGCTCT GCCCATGCTG
AAGAAAATCA GCACGAACAG AGCCCATCCG TTCAACGCAC TGGCAAAGCA GGTGTTACAA
AAGGTGCAGT AA
 
Protein sequence
MKLSEDQYEI IEAYLTNELS APDRASFERD LLTDAELRAE VDRQRTIRMG LRALGIERAL 
ERAKSQYKAE LERTETAPAE QPVVRPFISW RYWAAAASIV AVLGAGYYTY QQTIGQQSDI
AFAETLASDP AAELTKDFPA GALTPSTRTE FLEALKKYKA GKYDEVIARL KTLPADKQSI
HYKNYFLGLS YLANKQPGAA IPLLSKAQAS SSLAIRQKAE WFLALAYVKN EQKEKALPML
KKISTNRAHP FNALAKQVLQ KVQ