Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2958 |
Symbol | |
ID | 8726709 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 3572659 |
End bp | 3574005 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | Mn2+/Fe2+ transporter, NRAMP family |
Protein accession | YP_003387769 |
Protein GI | 284037839 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGCAA CGAATACGTC CATGAAAGGC TGGCGGCAGG AGAATACGAC AAATTCACTG TCCGACGTAC ATAGTTCAGT TCATGTGCCT ATAGGCGCAG GATTTTTCAA GACCTTACGG GCTTATGCAG GCCCTGGCCT TATGGTTGCC GTTGGGTATA TGGACCCCGG TAACTGGGCT ACGGATATTG CCGGTGGTGC GCGTTATGGC TACAAACTCC TGTCGGTTGT GCTGATATCC AACCTGTTCG CCATTCTGCT ACAGCACTTA GCCCTGAAAC TTGGTATTGC TACCGGCCGG GACCTTGCGC AGGCCTGCCG GGATAATTTT AGCCGTCCCG TTGCCGTCGG TCTGTGGCTG CTGGCCGAAG TTGCCATTGC CGCCACCGAT CTGGCCGAGG TGATTGGCTC GGCCATTGCC CTGAATCTGT TGTTTGGCTT ACCCCTAACC ATTGGTATTC TGCTGACAGC GCTGGATGTG TTGCTGCTGT TATATCTGCA GAATAAAGGC TTCCAATTAC TGGAGCGAGT GGTTGCCAGC CTAATTTTCC TTATTGTCGG CTGTTTTGGG TACGAATTGC TCGTATCCCG TCCCGATATT GCCAGTGTGG CAAGTGGCCT GATTCCACGT ACCGAAGTTA TCACCAATCC GGGTATGCTT TATATTGCCA TTGGTATTTT GGGAGCCACC GTCATGCCGC ATAATCTGTA TCTGCATTCC AGCATCGTAC AAACCCGCGA TTTTGGCCGC ACGGATACTG GTCGGCAATC GGCCATCAAG TTTGCTACAA TAGACTCTAC GGTTTCGCTC TTTCTGGCAT TTTTCATCAA TGCCGCCATT CTGATTCTAT CGGCCTCTGC TTTTCATTTT TCGGGCAACC AGCAGGTGGC AGACATCACC GATGCCCACC GCCTGCTCGA CCCGATTCTG GGTGTAAAAC TAGCCGGTAT TCTATTTGCC GTTGCCTTAC TGGCATCGGG TCAGAATTCA ACCCTGACGG GCACGCTGGC CGGTCAAATT GTTATGGAAG GGTTTGTAAA CCTACGGGTC AAGCCCTGGC TGCGTCGGTT AATTACGCGG CTGGTGGCCA TTGTTCCGGC TTTGGTCGTT GCTATTCTTT ACGGGGAACA CGGCACCAGC GAACTACTCG TATTTAGTCA GGTTATCCTT TCGCTTCAGT TAAGTTTTGC CGTTGTTCCG CTGGTTTCCT TCACGAACAA CAAGGCTAAA ATGGGTCGCT TCGTCAATCC ATCCTGGATA AAATGGTTAT CCTGGGTGGT AGCTGTGCTC ATCATCGGGC TAAACGGCTA TCTGCTGTGG GACACGGTTT TGAAGATGGT TCGTTAA
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Protein sequence | MEATNTSMKG WRQENTTNSL SDVHSSVHVP IGAGFFKTLR AYAGPGLMVA VGYMDPGNWA TDIAGGARYG YKLLSVVLIS NLFAILLQHL ALKLGIATGR DLAQACRDNF SRPVAVGLWL LAEVAIAATD LAEVIGSAIA LNLLFGLPLT IGILLTALDV LLLLYLQNKG FQLLERVVAS LIFLIVGCFG YELLVSRPDI ASVASGLIPR TEVITNPGML YIAIGILGAT VMPHNLYLHS SIVQTRDFGR TDTGRQSAIK FATIDSTVSL FLAFFINAAI LILSASAFHF SGNQQVADIT DAHRLLDPIL GVKLAGILFA VALLASGQNS TLTGTLAGQI VMEGFVNLRV KPWLRRLITR LVAIVPALVV AILYGEHGTS ELLVFSQVIL SLQLSFAVVP LVSFTNNKAK MGRFVNPSWI KWLSWVVAVL IIGLNGYLLW DTVLKMVR
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