| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2949 |
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| Symbol | |
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| ID | 8726700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 3562042 |
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| End bp | 3563472 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_003387760 |
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| Protein GI | 284037830 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0738296 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.70273 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAAAA CACGCATTTA TATAGGACTG GGGATTACCT GCATGACGTT AGCCATAACG
TCATGCAAAA CCCCGGCATT GGTTACCCGA ACCGAGAACA GAAACGTTCC TGTCACTTAC
AACACCGGTC AGGATACCCT AAATACAGGG AAGGTCAACT GGCGGGAATT TTTCACCGAC
CCTCACCTGT CGGCCCTGAT TGATACGGCT CTTGGAAACA ACCAGGAACT GAACATCAGC
TTGCAGGAGA TTCAGGTTGC CCAGAATGAG ATTAGAGCCA GAACCGGCGA GTATCTGCCG
TTTGTAGGCC TTCAGGCGGG AGCCGGTATC GATAAGGTAG GCCGGTACAC CCGGTCGGGA
GCTATTGAAG AAAGTACGGA AATCAGGCCG GGCCACAATT TCCCAAATCC CCTGCCCGAC
TTCCTGCTGT CGGCCAATGC TTCCTGGCAG GTCGACATCT GGAACAAGCT GCACAACGCC
AAACGGGCAG CCGCCATCCG GTATTTGTCG TCCATTGAAG GGAAAAACTT CACAGTTACT
AACCTGGTTG CCGAAATCGC AAACTCGTAT TACGAGCTGC TGGGACTCGA TAGCCAACTG
GATATCGTTA AGCGGAACAT CGACATTCAG ACCAATGCCT TGTCTATTGT CCGGCTGGAA
AAAGAATCGG CCAAAGTGAC GGAACTGGCC GTGCGTCGAT TCGAAGCCCA GGTGCTCCGT
ACCCAAAGTC TGCAATTCGA CATTCAGCAG CGTATTACGG AAACCGAGAA CCACATCAAT
TTTCTGGTGG GTCGATTCCC GCAGCCCGTT CAGCGGAGTA CGCAGGATTT CAATACGCGA
ATACCCGAAG TTATGCATGC CGGTATTCCA ACGCAGCTGT TGCAGAACCG GCCTGATATC
CGACGGGCCG AGCGGGAGCT GGAAGCGGCC AAGCTGGATG TTCAGGTGGC ACGGGCTAAC
TTTCTGCCGT CGCTGGATTT ATCGGCCGCT GTGGGGTTCA ACTCGTACAA GCCAACGCTT
CTGTTAACGC CTGAGTCGTT TCTCTATTCA TTGATTGGCG GCTTTACCCG GCCATTGATC
AACCGGAATT CAATAAAAGC GATGTACTAT AGCGCGAATG CCAAGCAGAT TCAGGCGGTT
TACAATTACG AACGCACGAT TCTTAACGCC TACATCGAAG TAGCGAACCA GATAGCCAAT
ATCAACAACC TGCAACGAAG CTACGATTTG AAGGCCCGGC AGGTAGATGC GCTCATCCAG
TCGACCAATA TTTCAAATAC GCTTTTCAAA TCGGCACGAG CCGACTACAT GGAAGTGCTA
CTGACCCAAC GCGATGCGCT GGAATCACGG TTCGATCTGG TTGAAACGAA AGTACAGCAA
TTGAATGCCA TGGTTAATAC CTACCGGGCA TTGGGTGGCG GCTGGAAGTA A
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| Protein sequence | MFKTRIYIGL GITCMTLAIT SCKTPALVTR TENRNVPVTY NTGQDTLNTG KVNWREFFTD
PHLSALIDTA LGNNQELNIS LQEIQVAQNE IRARTGEYLP FVGLQAGAGI DKVGRYTRSG
AIEESTEIRP GHNFPNPLPD FLLSANASWQ VDIWNKLHNA KRAAAIRYLS SIEGKNFTVT
NLVAEIANSY YELLGLDSQL DIVKRNIDIQ TNALSIVRLE KESAKVTELA VRRFEAQVLR
TQSLQFDIQQ RITETENHIN FLVGRFPQPV QRSTQDFNTR IPEVMHAGIP TQLLQNRPDI
RRAERELEAA KLDVQVARAN FLPSLDLSAA VGFNSYKPTL LLTPESFLYS LIGGFTRPLI
NRNSIKAMYY SANAKQIQAV YNYERTILNA YIEVANQIAN INNLQRSYDL KARQVDALIQ
STNISNTLFK SARADYMEVL LTQRDALESR FDLVETKVQQ LNAMVNTYRA LGGGWK
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