Gene Slin_2931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2931 
Symbol 
ID8726682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3539551 
End bp3540768 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content53% 
IMG OID 
Product3-phosphoshikimate 1-carboxyvinyltransferase 
Protein accessionYP_003387743 
Protein GI284037813 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCGGA CCACGATTCC ACTGGCTTCA TCCAAAAGCG AAAGTAATCG CGCTTTAATT 
ATCGATGCGC TTACCGGCTT TCGCTGCGAT TTGCAAAACC TGTCAACCGC CCGCGATACC
CAGACGATGA TCCGGCTGCT GAAATCGGAG GACGCCACTG CTGATGTGCT GGACGCCGGA
ACTACGATGC GGTTTCTTAC CGCCTATTTC AGCGTAACGG GGCAGCAGAA AACGATGACG
GGCACACCAC GGATGTGTGA GCGCCCAATT GGTATTCTGG TCGATGCCCT GCGTTCGCTG
GGTGCCGATA TTACGTACCT CAGAAACGAA GGCTATCCAC CCCTGCAAAT CAATGGGTTT
TCGCCCTCTG CTGAATCGAC TAACCGGCTT AGTATCCGTG GCGATGTGAG CAGTCAGTAC
ATTTCGGCGC TGGTCATGAT TGCCCCTTTG CTGCCTGGTG GCCTGACACT CGAATTGACC
GGTGCCATTG GTTCCCGGCC GTATATAGAG ATGACGCTGG AGCAGATGCG TTACTTTGGA
GCCGATGTTC GGGCTGATTG GGAAACAAAA ACGATAACGG TAGCCTCCAG CCCGTATGTA
CCCAAGCCGT ATGCCATCGA GTCGGATTGG TCGGGCGCCA GTTATTGGTA CAGTGTAGCC
GCACTGGCAA TGGATGAAAC GGCTGAAATA AATCTGCTTG GTCTTAAAGC GAGATCGTTG
CAGGGCGATA GCGCTATTGT GGAAATCATG CGTTCCCTGG GCGTGGAGAG TACGTTTACA
GATTCGGGCG TTCGGCTAAC GAAGATACCG ACGCAGCAAT CGCTGACCTG GGACTTCACC
GATTGCCCGG ACCTGGCCCA AACCGTTGCC GTGTGCGCAG CTGTAAAAGG CGTTGTGTTG
CGGATGACTG GTATCGAGAG TTTGAAAATC AAAGAAACCG ACCGGGTAGC TGCGTTACAG
GCCGAGTTGC AAAAGATCGG TGCGGAGCTG GTAGAACTTG AAACTAATCA TCTGTACGAA
GTGCATCAGC TGGCAATAGC CCCCCCCGGC CCGGCAACTA TTGACACATA CGATGATCAT
CGTATGGCCA TGGCCTTTGC TCCGGTAGCT ATGCAGAAGG AAATCATTAT CGATGAGCCG
GGTGTTGTAG CCAAGTCGTA CCCGTCTTTC TGGGAAGATA TGGCCAGGGT AACAACCGTC
AAGTTTATAA ACGAATAA
 
Protein sequence
MVRTTIPLAS SKSESNRALI IDALTGFRCD LQNLSTARDT QTMIRLLKSE DATADVLDAG 
TTMRFLTAYF SVTGQQKTMT GTPRMCERPI GILVDALRSL GADITYLRNE GYPPLQINGF
SPSAESTNRL SIRGDVSSQY ISALVMIAPL LPGGLTLELT GAIGSRPYIE MTLEQMRYFG
ADVRADWETK TITVASSPYV PKPYAIESDW SGASYWYSVA ALAMDETAEI NLLGLKARSL
QGDSAIVEIM RSLGVESTFT DSGVRLTKIP TQQSLTWDFT DCPDLAQTVA VCAAVKGVVL
RMTGIESLKI KETDRVAALQ AELQKIGAEL VELETNHLYE VHQLAIAPPG PATIDTYDDH
RMAMAFAPVA MQKEIIIDEP GVVAKSYPSF WEDMARVTTV KFINE