Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2931 |
Symbol | |
ID | 8726682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 3539551 |
End bp | 3540768 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
Protein accession | YP_003387743 |
Protein GI | 284037813 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCCGGA CCACGATTCC ACTGGCTTCA TCCAAAAGCG AAAGTAATCG CGCTTTAATT ATCGATGCGC TTACCGGCTT TCGCTGCGAT TTGCAAAACC TGTCAACCGC CCGCGATACC CAGACGATGA TCCGGCTGCT GAAATCGGAG GACGCCACTG CTGATGTGCT GGACGCCGGA ACTACGATGC GGTTTCTTAC CGCCTATTTC AGCGTAACGG GGCAGCAGAA AACGATGACG GGCACACCAC GGATGTGTGA GCGCCCAATT GGTATTCTGG TCGATGCCCT GCGTTCGCTG GGTGCCGATA TTACGTACCT CAGAAACGAA GGCTATCCAC CCCTGCAAAT CAATGGGTTT TCGCCCTCTG CTGAATCGAC TAACCGGCTT AGTATCCGTG GCGATGTGAG CAGTCAGTAC ATTTCGGCGC TGGTCATGAT TGCCCCTTTG CTGCCTGGTG GCCTGACACT CGAATTGACC GGTGCCATTG GTTCCCGGCC GTATATAGAG ATGACGCTGG AGCAGATGCG TTACTTTGGA GCCGATGTTC GGGCTGATTG GGAAACAAAA ACGATAACGG TAGCCTCCAG CCCGTATGTA CCCAAGCCGT ATGCCATCGA GTCGGATTGG TCGGGCGCCA GTTATTGGTA CAGTGTAGCC GCACTGGCAA TGGATGAAAC GGCTGAAATA AATCTGCTTG GTCTTAAAGC GAGATCGTTG CAGGGCGATA GCGCTATTGT GGAAATCATG CGTTCCCTGG GCGTGGAGAG TACGTTTACA GATTCGGGCG TTCGGCTAAC GAAGATACCG ACGCAGCAAT CGCTGACCTG GGACTTCACC GATTGCCCGG ACCTGGCCCA AACCGTTGCC GTGTGCGCAG CTGTAAAAGG CGTTGTGTTG CGGATGACTG GTATCGAGAG TTTGAAAATC AAAGAAACCG ACCGGGTAGC TGCGTTACAG GCCGAGTTGC AAAAGATCGG TGCGGAGCTG GTAGAACTTG AAACTAATCA TCTGTACGAA GTGCATCAGC TGGCAATAGC CCCCCCCGGC CCGGCAACTA TTGACACATA CGATGATCAT CGTATGGCCA TGGCCTTTGC TCCGGTAGCT ATGCAGAAGG AAATCATTAT CGATGAGCCG GGTGTTGTAG CCAAGTCGTA CCCGTCTTTC TGGGAAGATA TGGCCAGGGT AACAACCGTC AAGTTTATAA ACGAATAA
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Protein sequence | MVRTTIPLAS SKSESNRALI IDALTGFRCD LQNLSTARDT QTMIRLLKSE DATADVLDAG TTMRFLTAYF SVTGQQKTMT GTPRMCERPI GILVDALRSL GADITYLRNE GYPPLQINGF SPSAESTNRL SIRGDVSSQY ISALVMIAPL LPGGLTLELT GAIGSRPYIE MTLEQMRYFG ADVRADWETK TITVASSPYV PKPYAIESDW SGASYWYSVA ALAMDETAEI NLLGLKARSL QGDSAIVEIM RSLGVESTFT DSGVRLTKIP TQQSLTWDFT DCPDLAQTVA VCAAVKGVVL RMTGIESLKI KETDRVAALQ AELQKIGAEL VELETNHLYE VHQLAIAPPG PATIDTYDDH RMAMAFAPVA MQKEIIIDEP GVVAKSYPSF WEDMARVTTV KFINE
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