| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2928 |
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| Symbol | |
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| ID | 8726679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 3533653 |
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| End bp | 3536751 |
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| Gene Length | 3099 bp |
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| Protein Length | 1032 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | |
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| Product | heavy metal efflux pump, CzcA family |
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| Protein accession | YP_003387740 |
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| Protein GI | 284037810 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.190271 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAT TCATTAAAAG CATACTTTCC TTCTCACTGA AGAACAAGTT TTTTATATTC
TTTCTTACAG CACTGGCCGT TGTTGCCGGT ATTATCAGCT ATCAGAATAC GCCCATAGAA
GCCTTCCCGG ATGTAACGAA TACCCAGATT ACCCTGATCA CCCAATGGCC CGGACGGTCG
GCGGAAGAGG TCGAAAAGTT CGTTACCATA CCGATTGAAA TCGGGCTGAA CTCCGTCCAG
AAACGGACCG ATATACGCTC TACTTCCCTG TTTGGCCTGT CGGTCGTCAA AATCCTGTTC
GACGACGGGG CCGACGATGC CTTTGCCCGC CAGCAGGTGA ACAACCTGCT CAGTGGCATC
GAATTACCCG AAGGTATTCG ACCGGATGTA CAGCCGCCTT ATGGCCCCAC GGGAGAGATT
TTCCGGTATA CCCTTCAGTC GCCTACCCGA ACCGCCCGCG AACTGAAAAC GATACAGGAC
TGGGTCATTG ACCGTCAGCT AAAAAGTGTG CCGGGCGTAG CCGATGTCGT CAGCTTTGGC
GGTGAGGTAA AGACCTACGA GATTTCGGTC GACCCACGCC GGTTGATGGA CTATAACATC
ACACCCCTCC AGCTCTACCA GGCCGTGGCG AATGCCAACG TGAACGTGGG GGGCGACGTC
ATCGAAAAAA ATTCGGAAGC CTATGTAGTA CGGGGTATTG GTCTGTTGAA AAACCAGCAG
GATATCCAGA ATATCATCGT AAAGAATATT AAGGGAACGC CCATTACGGT TCAGAATGTG
GCGCAGGTCT CGGAGTCGGC CCTGCCCCGG CTCGGACAAG CCGGTCGCGA CAAAAAAGAT
GATGAAGTAG AGTGTATCAT TATTATGCGC AAGGGCGAAA ACCCAAGCGA GGTCATTGAG
CGGGTAAAGG CTAAAATCAA TGAGCTAAAC AATAGCATTC TGCCCAACGA TGTGCAGATC
AACACGTTTT ACAACCGCGA AACGCTCATC AACTTCGCTA CCCACACGGT AACGCATAAC
TTAATTGAAG GCATAATTTT CGTAACGGTC ATCGTGTTTC TGTTCATGGC CGACTGGCGC
ACCACGGTCA CGGTGTCTAT CGTGATTCCT CTGGCGTTAT TGTTTGCCTT CATCTGCTTA
CGGCTAAAGG GCATGTCGGC CAACTTGCTG TCGATGGGTG CCATTGATTT CGGTATCATC
GTCGACGGTG CGGTGGTGAT GGTAGAGGGT ATTTTCGTTA CGCTCGACGA ACTGGCCCAT
CAGCAGGGCA TGGCTAAGTT CAACCGCCTG GCCAAGTTGG GTATTCTCCG CCGAACCGGA
ACAGAAATGG GCAAGGCTAT TTTCTTTTCG AAGGCTATTA TCATCACCTG TCTGATCCCG
ATTTTCTCCT TTCAGAAAGT AGAAGGAAAA ATGTTCTCCC CACTAGCCTG GACACTTGGT
TTTGCGCTGT TGGGCGCGCT TATTTTCACC CTGACACTGG TGCCTGTTCT GGCCAGTATT
CTGCTGAAAA AGAACGTTCG GGAGAAACAC AACCCGTTTG TCAACTTCGT CACCAAGTAC
TCGACCCGGC TCTTCGGTTT TACGTTTGCG CATAAGAGAA CAAGCATACT GTTTACGGGT
TTGCTTGTGC TGGTTGGTTT GTCGGGTTTC ACCCTGCTCG GCACGGAGTT TTTACCCGAA
TTAAATGAGG GCTCCATTTA TGTGAGGGCC ACCATGCCGA TGAGCATTTC GCTCCCCGAA
TCAGTGAAGC AAAGTGTGCA GATGCGCCAC ATTTTCGAGC AGTTTCCGGA AGTAAAAGGT
GTTATATCGC AAACGGGACG ACCGAACGAC GGTACCGATC CAACGGGTTT TTACAACATC
GAGTTTCTGG TCGATATTTA TCCGCAGGAT GACTGGAAAA GCGGATTAAC CAAGGAAGAA
CTAGTCGAGA AGATGCAGGA AAAACTCAGC GTTTTTCCGG GTGTAAATTT TGGGTTTTCG
CAGCCCATCA TGGATAACGT AGAGGAAGCT GTTTCGGGCG TGAAAGGCTC CATAGCCGTC
AAGATTTACG GCCCCGATCA AAACATACTG GAAGCCAAAG CGGGCGAAAT CAGGAATCAG
CTGGCCACCG TTCAGGGTAT AGAAGACCTG GGAGTGATTC GCACCACGGG CCAGCCCGAA
ATGCGGATCG AACTGGACGA ACATAAACTG GCGTTATACG GCATTAATAA AGCGGATGCC
GAAGCGGTCA TTGAAATGGC CATTGGCGGT AAAGCAGCTA CGCAGATTTA CGAAGGTGAG
CGAAAATTCG ACCTGCGCAT CCGGTACGAC CGGCCTTTCC GGTCCAGCGA GCAGCAAATT
AGCCAGCTAA TGGTTCCTAC TGAAAACGGC AGTATGATTC CCATCAAGGA GATCGCCAAT
GTATACACCC AAACGGGACC GGTGTTGATT TTTCGGGAAG GGGGCCAGCG CTACGGGGCT
GTGAAGTTTT CGGTTCGGGG TCGCGACATG GGTAGCGCAG TGGCCGAGGC TCAACAAAAA
GTACAGGCCA ATGTAAAATT ACCGGCGGGC TACACCGCTA AATGGGCGGG TGATTTTGAG
AACCAGCAAC GGGCCACTGC CCGCCTGGCG CAGGTTGTTC CCATCAGTTT GCTGGCGATC
TTCTTTATTT TATTTATTCT TTTCGGTAAT GTAAAAGACG CTGGGCTTGT GTTATTCAAT
GTGCCTTTTG CCATTATTGG CGGTATTGCT GCCTTACTGC TAACGCATGT CAATTTTAGC
ATTTCTGCCG GCATTGGTTT TATTGCCCTC TTTGGCATTT GCATTCAGAA TGGCGTCATT
TTAATATCTG TTTTCAAGAA GAATTTACGA AACGGGCTTC CCCTGAATGA CGCCATTCGG
GAGGGTGTTG TTTCCCGTAT ACGCCCGGTC GTCATGACCG CCATGATGGC TGGCATTGGT
CTGATCCCGG CGGCTATTTC GCACGGAATT GGCTCTGAAA CGGCGAAACC ACTGGCTATT
GTTGTCATTG GTGGTCTTAT TACGGCAACT TTGTTAACCC TGTTTATATT TCCCCTTATT
TTCTATGCTT TTTATAGGCA AAAGTTTAGG GATATTTAA
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| Protein sequence | MNKFIKSILS FSLKNKFFIF FLTALAVVAG IISYQNTPIE AFPDVTNTQI TLITQWPGRS
AEEVEKFVTI PIEIGLNSVQ KRTDIRSTSL FGLSVVKILF DDGADDAFAR QQVNNLLSGI
ELPEGIRPDV QPPYGPTGEI FRYTLQSPTR TARELKTIQD WVIDRQLKSV PGVADVVSFG
GEVKTYEISV DPRRLMDYNI TPLQLYQAVA NANVNVGGDV IEKNSEAYVV RGIGLLKNQQ
DIQNIIVKNI KGTPITVQNV AQVSESALPR LGQAGRDKKD DEVECIIIMR KGENPSEVIE
RVKAKINELN NSILPNDVQI NTFYNRETLI NFATHTVTHN LIEGIIFVTV IVFLFMADWR
TTVTVSIVIP LALLFAFICL RLKGMSANLL SMGAIDFGII VDGAVVMVEG IFVTLDELAH
QQGMAKFNRL AKLGILRRTG TEMGKAIFFS KAIIITCLIP IFSFQKVEGK MFSPLAWTLG
FALLGALIFT LTLVPVLASI LLKKNVREKH NPFVNFVTKY STRLFGFTFA HKRTSILFTG
LLVLVGLSGF TLLGTEFLPE LNEGSIYVRA TMPMSISLPE SVKQSVQMRH IFEQFPEVKG
VISQTGRPND GTDPTGFYNI EFLVDIYPQD DWKSGLTKEE LVEKMQEKLS VFPGVNFGFS
QPIMDNVEEA VSGVKGSIAV KIYGPDQNIL EAKAGEIRNQ LATVQGIEDL GVIRTTGQPE
MRIELDEHKL ALYGINKADA EAVIEMAIGG KAATQIYEGE RKFDLRIRYD RPFRSSEQQI
SQLMVPTENG SMIPIKEIAN VYTQTGPVLI FREGGQRYGA VKFSVRGRDM GSAVAEAQQK
VQANVKLPAG YTAKWAGDFE NQQRATARLA QVVPISLLAI FFILFILFGN VKDAGLVLFN
VPFAIIGGIA ALLLTHVNFS ISAGIGFIAL FGICIQNGVI LISVFKKNLR NGLPLNDAIR
EGVVSRIRPV VMTAMMAGIG LIPAAISHGI GSETAKPLAI VVIGGLITAT LLTLFIFPLI
FYAFYRQKFR DI
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