Gene Slin_2916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2916 
Symbol 
ID8726667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3520324 
End bp3521367 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content51% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003387728 
Protein GI284037798 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.215863 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACATTA ACATCTCTAC ACTGCTCGAT GTTGCCATTG GGCTCGTTTT CATCTTTTTC 
GTTTTTAGCA TTTTTGTCTC GGGAATTGTT GAATTAATCA ACAGCCTGAT CGAGCAACGG
GCGAGGCTGC TCCGCATCGC GCTGGATAAA TTACTGGGGC AAGCCCTGGC AAACGATTTT
TTTGACCATC AGCTTACAAA AATCAAGCAG CAACGGTTTG CCGGTTTCCT GAAGCCCATT
AACTACCTCT CTGCTGAGTC CTTTTCAACG GTGCTGATTG ACTTATTAAC CCGCTCGGCT
GGCCCGGTGC CGCCGGGACT AAAGCCCACA GAAGCGACGT TTGACAAAAT AAAACAACTC
AGCAGCCAAC CCGATGCCGA AAAATTTAAG GCCGTCATTG ACTTGATTGA ACCCATACTG
GCCAAATCCG ACAACTTTCA GACGTTTAAA TCGGAGCTGG AAAAATGGTA TGACGGCTAC
ATGGAGCAAG TGTCGGGCTG GTTTAAGCGC TACGCACAGG GCGTGGTTTG GGGTGTTTCT
ATTGCCGTAA CCTTGGTGCT GAATGTCGAT ACCATTCACC TCACCAATCA GCTCTTCAAC
GACAACGGTC TGCGAGATCG ATTGGTAGAG GCCGCCGTAA AAACGACGGC GAATGGGGGC
GCATCCTTTA ATAAAGATGC TGCTTTTTTA AGCCAGCTTG CTCAGTACGA CTCCAATCTT
GTTACAAAAG ACGCTCTTGA CAGCGAGAAG ATCCAGATCA AACCATCGCT AACGGGTGCT
GACAGCCTTG TGGTGCAGGC GGTCTATGTC GATTTTGTGA AAAGTCGGGT AGCCGATCTT
AAGTTGCCGG TTGGCTGGGT GCTTACCGGT AAACAAGGCC CCTGGTTACC GGGGCAGGAT
CATCTCGTCG CGTTGTTAGG CTGGGTGCTA TCGGCTGCAG CTCTTTCGTT TGGGGCTCCG
TTCTGGTTCG ATCTGTTGCT CAAACTGGTC AATATCCGCA ATACGGCCCG TCGCCCGCCC
GGCAATGCCG GTTCGGGCAA ATGA
 
Protein sequence
MHINISTLLD VAIGLVFIFF VFSIFVSGIV ELINSLIEQR ARLLRIALDK LLGQALANDF 
FDHQLTKIKQ QRFAGFLKPI NYLSAESFST VLIDLLTRSA GPVPPGLKPT EATFDKIKQL
SSQPDAEKFK AVIDLIEPIL AKSDNFQTFK SELEKWYDGY MEQVSGWFKR YAQGVVWGVS
IAVTLVLNVD TIHLTNQLFN DNGLRDRLVE AAVKTTANGG ASFNKDAAFL SQLAQYDSNL
VTKDALDSEK IQIKPSLTGA DSLVVQAVYV DFVKSRVADL KLPVGWVLTG KQGPWLPGQD
HLVALLGWVL SAAALSFGAP FWFDLLLKLV NIRNTARRPP GNAGSGK