Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2915 |
Symbol | |
ID | 8726666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 3519246 |
End bp | 3520283 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003387727 |
Protein GI | 284037797 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00698694 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGGTC GTCTCTGGTT ACTCATCCTG TTCCTGTCAG CCGTATCCTG CGTAGAACCT TATGACCCGC AGTTGAAAGG TGGAACGAAA TACTTGGTAT TTGAAGGAAC CCTCACCAAC GCTCCCGGCC CCTACCGGTT TACGCTGACG TTTTCGGCGG GCTACAACAG TCAAGAGAGC GTCTTTGATG AGCGGGTGAA GGGGGCCACT ATGACTCTTT CCGACGACCA GAACCGGCGT ACGATTTTCC TTGACGATGG CCGGGGAAAC TTCAGTTCAC CAGCGGGTTT TCGAGGGGAG ACAGACCGCA CCTATACGCT GTCCATTGCT TACCAGGGGA TGACCTACCG CTCCGACCCC GAACTCCTGC GGCCAGTTGC ACCCATTGAC ACCGTATACA CCCGGTTTCA ACCCATTGCC CAGCCCGGCA GTACCATTAA CGGCGAGTTT AAGGTTTTTA TCGACGTTAT CGATCCGCCT GGTGAGGAGA ACTATTACCA GTGGGATTGG ATTCACTTCG AAAAAGCCGA TCAATGTTTA CTGTTCAGGC CCAGCGGCAC AAACGTGACC TATGCCCAGA GATGCTGCTC TGACTGCTGG AACATCACCC GTAGCACAGG TCAGATTTTG CTGGCCTCTG ACCGGCTCAT TAATGGACGT CGACTAAGCG GTCAGCGTGT AGGTGCCGTA CCGAATGATG ATATTTCGCC TTATTATCTG CGTATTGGCC AACAGTCCTT AAATCGGGGG GCTTATCAAT ACTGGCTGGC GATTCAAAAC CTAACGGGTA ATGTGGGCAG TGTCTTCGAT GTACCACCCG CTGCACTGAC GGGTAATTTG CGAAATACAA ATCCCGCCGG GCCACCACTA TTGGGGTATT TTCAGGTATC GGCCCGGCGG GAAAAAATTG TGTATATCAA CCGACTTAGC GCTCCTTTAT TGCCCTTTGC TGTATCCGAA TTTCCCTTCT GGAGTACGTG CACAGCTTGT ACCGAAAGTT CATACCGCAC AGAGCAACGA CCAGATGGCT GGCGATAA
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Protein sequence | MTGRLWLLIL FLSAVSCVEP YDPQLKGGTK YLVFEGTLTN APGPYRFTLT FSAGYNSQES VFDERVKGAT MTLSDDQNRR TIFLDDGRGN FSSPAGFRGE TDRTYTLSIA YQGMTYRSDP ELLRPVAPID TVYTRFQPIA QPGSTINGEF KVFIDVIDPP GEENYYQWDW IHFEKADQCL LFRPSGTNVT YAQRCCSDCW NITRSTGQIL LASDRLINGR RLSGQRVGAV PNDDISPYYL RIGQQSLNRG AYQYWLAIQN LTGNVGSVFD VPPAALTGNL RNTNPAGPPL LGYFQVSARR EKIVYINRLS APLLPFAVSE FPFWSTCTAC TESSYRTEQR PDGWR
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