Gene Slin_2915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2915 
Symbol 
ID8726666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3519246 
End bp3520283 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content52% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003387727 
Protein GI284037797 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00698694 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGGTC GTCTCTGGTT ACTCATCCTG TTCCTGTCAG CCGTATCCTG CGTAGAACCT 
TATGACCCGC AGTTGAAAGG TGGAACGAAA TACTTGGTAT TTGAAGGAAC CCTCACCAAC
GCTCCCGGCC CCTACCGGTT TACGCTGACG TTTTCGGCGG GCTACAACAG TCAAGAGAGC
GTCTTTGATG AGCGGGTGAA GGGGGCCACT ATGACTCTTT CCGACGACCA GAACCGGCGT
ACGATTTTCC TTGACGATGG CCGGGGAAAC TTCAGTTCAC CAGCGGGTTT TCGAGGGGAG
ACAGACCGCA CCTATACGCT GTCCATTGCT TACCAGGGGA TGACCTACCG CTCCGACCCC
GAACTCCTGC GGCCAGTTGC ACCCATTGAC ACCGTATACA CCCGGTTTCA ACCCATTGCC
CAGCCCGGCA GTACCATTAA CGGCGAGTTT AAGGTTTTTA TCGACGTTAT CGATCCGCCT
GGTGAGGAGA ACTATTACCA GTGGGATTGG ATTCACTTCG AAAAAGCCGA TCAATGTTTA
CTGTTCAGGC CCAGCGGCAC AAACGTGACC TATGCCCAGA GATGCTGCTC TGACTGCTGG
AACATCACCC GTAGCACAGG TCAGATTTTG CTGGCCTCTG ACCGGCTCAT TAATGGACGT
CGACTAAGCG GTCAGCGTGT AGGTGCCGTA CCGAATGATG ATATTTCGCC TTATTATCTG
CGTATTGGCC AACAGTCCTT AAATCGGGGG GCTTATCAAT ACTGGCTGGC GATTCAAAAC
CTAACGGGTA ATGTGGGCAG TGTCTTCGAT GTACCACCCG CTGCACTGAC GGGTAATTTG
CGAAATACAA ATCCCGCCGG GCCACCACTA TTGGGGTATT TTCAGGTATC GGCCCGGCGG
GAAAAAATTG TGTATATCAA CCGACTTAGC GCTCCTTTAT TGCCCTTTGC TGTATCCGAA
TTTCCCTTCT GGAGTACGTG CACAGCTTGT ACCGAAAGTT CATACCGCAC AGAGCAACGA
CCAGATGGCT GGCGATAA
 
Protein sequence
MTGRLWLLIL FLSAVSCVEP YDPQLKGGTK YLVFEGTLTN APGPYRFTLT FSAGYNSQES 
VFDERVKGAT MTLSDDQNRR TIFLDDGRGN FSSPAGFRGE TDRTYTLSIA YQGMTYRSDP
ELLRPVAPID TVYTRFQPIA QPGSTINGEF KVFIDVIDPP GEENYYQWDW IHFEKADQCL
LFRPSGTNVT YAQRCCSDCW NITRSTGQIL LASDRLINGR RLSGQRVGAV PNDDISPYYL
RIGQQSLNRG AYQYWLAIQN LTGNVGSVFD VPPAALTGNL RNTNPAGPPL LGYFQVSARR
EKIVYINRLS APLLPFAVSE FPFWSTCTAC TESSYRTEQR PDGWR