Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2907 |
Symbol | |
ID | 8726658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 3509394 |
End bp | 3510482 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | signal transduction histidine kinase, LytS |
Protein accession | YP_003387719 |
Protein GI | 284037789 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAAAC AGAAAATATA TTGGTTTTGT CAGTTATTTG GGTGGTCGCT CCTCATCCTG GTGGAGTACA TTGCCTACTT GCTGGAAGAT GGCTTCGATC CGGATACGCT GTACTTAGCC GTTGCCAATA TATTTCTTGG CATTACCCTG ACGCACCTTT ACCGGCTGAT GATTCAGCGG TGGAATTGGG TACGGTTGCC CTTCTTTCGC CTGGCACCAC GCGTACTCTT GTCCGTTTTT GTACTGGCCC TGATCATGAC CATGGTGAAT CTGCCCATGG ACCGATTGAT TGTGCCGCAG CATCTGATGG ATGAGCCCTG GCCGCTTTTC GGATACATCA TGACCTGGGG GAAAACAATG CTGGCCTGGG TATTGAGCTA CACCGCCTAT CATTACGTAG AAGAAAACCG CAATGCCGAA ATCGAAAAGA TTTTGTTGAA AACCAGTATC CGCGAAACTG AAGCCAAGGT ATTACGGTCG CAACTGAACC CGCATTTTGT CTTCAACGCC TTGAATAGCA TCCGCGCACT GGTGTTCGAA AATCCGGCCA AAGCGCAGCA GAGCATTACC CAGCTTTCGA ACCTGCTTCG CAACTCGCTC CTGGCCGACC GCCGGAAAAC CGTTGAACTG CGCGAAGAAA TCAAAACCGT TGAGGATTAC CTGGCCCTTG AAAAGGTACG TTACGAGGAC CGGCTGACGT CGCATATTGA ACTCGATGGT CGGACGCTGT TCTGGCAGGT GCCGCCTATG ATGCTGCAAA CGCTGGTCGA AAATGCCATC AAACACGGTG TATCAACGGC TATTCGGGGT GGATTTATTG AGGTACGCTC AAATCTGGTT GCCGATAAAC TTCACATCAT CATTCGCAAT ACAGGTGTGC TGGGCGATAA GAGTGCTTCG GGCGGATTCG GGCTGGCCAA TACAGCCCAG CGTTTAGAGC TTCTCTATGG CCCCGATGCC CGGTTTCAGA TTTTCCAGGA AGAAGAATCT GCCGAAAATG GACCTATTGT GTGTGCCGAA ATAACCATTC CGGCCCAGTC TGAAAGTATA TTCCGCAGGA AAGAGGTTGC TGTCAGAACG TCGGAGTGA
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Protein sequence | MSKQKIYWFC QLFGWSLLIL VEYIAYLLED GFDPDTLYLA VANIFLGITL THLYRLMIQR WNWVRLPFFR LAPRVLLSVF VLALIMTMVN LPMDRLIVPQ HLMDEPWPLF GYIMTWGKTM LAWVLSYTAY HYVEENRNAE IEKILLKTSI RETEAKVLRS QLNPHFVFNA LNSIRALVFE NPAKAQQSIT QLSNLLRNSL LADRRKTVEL REEIKTVEDY LALEKVRYED RLTSHIELDG RTLFWQVPPM MLQTLVENAI KHGVSTAIRG GFIEVRSNLV ADKLHIIIRN TGVLGDKSAS GGFGLANTAQ RLELLYGPDA RFQIFQEEES AENGPIVCAE ITIPAQSESI FRRKEVAVRT SE
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