Gene Slin_2907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2907 
Symbol 
ID8726658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3509394 
End bp3510482 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content51% 
IMG OID 
Productsignal transduction histidine kinase, LytS 
Protein accessionYP_003387719 
Protein GI284037789 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAAAC AGAAAATATA TTGGTTTTGT CAGTTATTTG GGTGGTCGCT CCTCATCCTG 
GTGGAGTACA TTGCCTACTT GCTGGAAGAT GGCTTCGATC CGGATACGCT GTACTTAGCC
GTTGCCAATA TATTTCTTGG CATTACCCTG ACGCACCTTT ACCGGCTGAT GATTCAGCGG
TGGAATTGGG TACGGTTGCC CTTCTTTCGC CTGGCACCAC GCGTACTCTT GTCCGTTTTT
GTACTGGCCC TGATCATGAC CATGGTGAAT CTGCCCATGG ACCGATTGAT TGTGCCGCAG
CATCTGATGG ATGAGCCCTG GCCGCTTTTC GGATACATCA TGACCTGGGG GAAAACAATG
CTGGCCTGGG TATTGAGCTA CACCGCCTAT CATTACGTAG AAGAAAACCG CAATGCCGAA
ATCGAAAAGA TTTTGTTGAA AACCAGTATC CGCGAAACTG AAGCCAAGGT ATTACGGTCG
CAACTGAACC CGCATTTTGT CTTCAACGCC TTGAATAGCA TCCGCGCACT GGTGTTCGAA
AATCCGGCCA AAGCGCAGCA GAGCATTACC CAGCTTTCGA ACCTGCTTCG CAACTCGCTC
CTGGCCGACC GCCGGAAAAC CGTTGAACTG CGCGAAGAAA TCAAAACCGT TGAGGATTAC
CTGGCCCTTG AAAAGGTACG TTACGAGGAC CGGCTGACGT CGCATATTGA ACTCGATGGT
CGGACGCTGT TCTGGCAGGT GCCGCCTATG ATGCTGCAAA CGCTGGTCGA AAATGCCATC
AAACACGGTG TATCAACGGC TATTCGGGGT GGATTTATTG AGGTACGCTC AAATCTGGTT
GCCGATAAAC TTCACATCAT CATTCGCAAT ACAGGTGTGC TGGGCGATAA GAGTGCTTCG
GGCGGATTCG GGCTGGCCAA TACAGCCCAG CGTTTAGAGC TTCTCTATGG CCCCGATGCC
CGGTTTCAGA TTTTCCAGGA AGAAGAATCT GCCGAAAATG GACCTATTGT GTGTGCCGAA
ATAACCATTC CGGCCCAGTC TGAAAGTATA TTCCGCAGGA AAGAGGTTGC TGTCAGAACG
TCGGAGTGA
 
Protein sequence
MSKQKIYWFC QLFGWSLLIL VEYIAYLLED GFDPDTLYLA VANIFLGITL THLYRLMIQR 
WNWVRLPFFR LAPRVLLSVF VLALIMTMVN LPMDRLIVPQ HLMDEPWPLF GYIMTWGKTM
LAWVLSYTAY HYVEENRNAE IEKILLKTSI RETEAKVLRS QLNPHFVFNA LNSIRALVFE
NPAKAQQSIT QLSNLLRNSL LADRRKTVEL REEIKTVEDY LALEKVRYED RLTSHIELDG
RTLFWQVPPM MLQTLVENAI KHGVSTAIRG GFIEVRSNLV ADKLHIIIRN TGVLGDKSAS
GGFGLANTAQ RLELLYGPDA RFQIFQEEES AENGPIVCAE ITIPAQSESI FRRKEVAVRT
SE