| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2897 |
|---|
| Symbol | |
|---|
| ID | 8726648 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 3500122 |
|---|
| End bp | 3501294 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003387709 |
|---|
| Protein GI | 284037779 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.905704 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGGG TAACGGCCAT TGATATTACC CGTGGGCTGG TGATGGTTAT TATGGCGCTC
GATCATGTCC GTGATCTGCT TCATACGCCC GCACTCACTC AGAACCCAAC CGATCTGGCG
ACAACGACAC CGGCTATTTT CATGACGCGG TGGATCACGC ACTTGTGTGC CCCAACCTTC
GTTTTTCTGT CGGGAACATC GGCGTATCTG TCGCTGAAAA AGCAACACGC GACGGCTGAA
ACGAACAAGT CGGCGCGAAG CTTTCTGCTG AAACGGGGAT TGGTGCTAAT CCTGCTCGAA
CTGACGGTTA TTAATTTCGC CTTTTGGTTC GACATCCGGT TTCAGTCGTT GATGTTACAG
GTTATTTACG CCATTGGTGG CGGGCTGGTT ATCCTCTCGA TCGTGTCGAA GTTACCGGCG
AAACAGGTTG GCCTGATTGG TTTAGTAATT GTGTTCGGAC ACAACATTCT CCAGCTTGTA
CCAACGTTCA CGAATCCAGC GGCTAAACTG CTGTGGGCAC TATTTTTCCG AACGGATTTC
TTTCCGGTAA GCCCCACTTT CGCCCTGCTG GTAGCCTATC CGCTGATTCC GTGGCTGGGA
ATTATGCTGG TTGGCTATGC CTGCGGTCAG CTGATGGAAC GGCCAATGGA GCAACGAAAA
CCGCTCTTGC TGCGAATCGG GGTAGGGGCG CTTGCTTTAT TTGTTCTACT GCGTTTCCTG
AATATATACG GCGATCCGGC TCCCTGGGCA CCTCAGAAAA GTGGCCTGTT TACGTTCCTG
TCGTTTATCA ATGTTACCAA ATATCCCCCA TCTCTGCTCT ATGACTTGCT CATGCTCGGC
CTGATGCTGG TCTTTCTATC TGCCATTGAT GGAGCTAATA ACCGCTTTAC CCGCTGGCTT
ACGGTGTATG GGAAGGTGCC TATGTTCTAT TACATTCTGC ACTGGTATCT GGTGCATCTG
TCGATGATCG GGATGAGTCT ACTGCAAGGA TATTCGTTGG CGGACCTCCC TTCGGGACCG
TTGAATTTTG GCCGACCAGC CGGTGCGGGT GTTTCGCTTG AACTTGTGTA CGTTGTCTGG
CTCGGGTTGG TTGTCCTGCT GTACCCACTC TGCAAGTGGT ACGGAAAGTA TAAAGCCGCT
CACGCTGAAA TTGGTTGGTT ACGCTATGTA TGA
|
|---|
| Protein sequence | MKRVTAIDIT RGLVMVIMAL DHVRDLLHTP ALTQNPTDLA TTTPAIFMTR WITHLCAPTF
VFLSGTSAYL SLKKQHATAE TNKSARSFLL KRGLVLILLE LTVINFAFWF DIRFQSLMLQ
VIYAIGGGLV ILSIVSKLPA KQVGLIGLVI VFGHNILQLV PTFTNPAAKL LWALFFRTDF
FPVSPTFALL VAYPLIPWLG IMLVGYACGQ LMERPMEQRK PLLLRIGVGA LALFVLLRFL
NIYGDPAPWA PQKSGLFTFL SFINVTKYPP SLLYDLLMLG LMLVFLSAID GANNRFTRWL
TVYGKVPMFY YILHWYLVHL SMIGMSLLQG YSLADLPSGP LNFGRPAGAG VSLELVYVVW
LGLVVLLYPL CKWYGKYKAA HAEIGWLRYV
|
|---|
| |